 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OBART07G20550.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
bHLH |
| Protein Properties |
Length: 289aa MW: 31781.7 Da PI: 6.4143 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OBART07G20550.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 16.1 | 2e-05 | 235 | 254 | 10 | 29 |
HHHHHHHHHHHHHHHCTSCC CS
HLH 10 rrRRdriNsafeeLrellPk 29
r+RR+riN+++ L+ l+P+
OBART07G20550.1 235 RKRRERINERLRILQNLVPN 254
9******************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 289 aa
Download sequence Send
to blast |
MAQFLGAHGD HCFTYEQMDE SMEAMAAMFL PGLDTDSNSS SGCLNYDVPP QCWPQHGHSS 60
SVTSFPDPAH SYGSFEFPVM DPFPIADLDT HCAIPYLTED LISPPHGNHP SARVEEATKV 120
VTPVATKRKS SAAMTVCPCK YLNRTVIYFS YHAVLFSMPN WIDELIQASK KSKKAGKKDP 180
IGSDEGGNTY IDTQSSSSCT SEEGNLEGNA KPSSKKMGTR ANRGAATDPQ SLYARKRRER 240
INERLRILQN LVPNGTKLLS SDDMWMYAPI AYNGVNISNI DLNISSLQK
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | CP012615 | 0.0 | CP012615.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 7 sequence. |
