PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM02G39710.1
Organism
Oryza glumaepatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 133aa    MW: 14177.9 Da    PI: 9.8288
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM02G39710.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1439.8e-1468117150
                      XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                      e+e ++++r++kNRe+A rsR+RK+a+++eLe++v  L +eN +Lk   +
  OGLUM02G39710.1  68 EEEERKTIRMMKNRESALRSRARKRAYVQELEKEVRRLVNENLKLKRHCK 117
                      678899************************************88885443 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.1E-1366118No hitNo description
PfamPF001705.9E-1168118IPR004827Basic-leucine zipper domain
SMARTSM003386.7E-868132IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.38170114IPR004827Basic-leucine zipper domain
CDDcd147072.58E-1472121No hitNo description
SuperFamilySSF579592.74E-1072118No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 133 aa     Download sequence    Send to blast
MAEQLGGVGS PQLSLSSCSS FLSISSAGTS AADGAPHLSL GVGGAEELDL LLQVGIGGGG  60
GGGGGDEEEE ERKTIRMMKN RESALRSRAR KRAYVQELEK EVRRLVNENL KLKRHCKQQP  120
TNKQSSHRRS SST
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0610860.0AK061086.1 Oryza sativa Japonica Group cDNA clone:006-206-G05, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015623884.15e-55protein FD
TrEMBLA0A0D9Z0P56e-89A0A0D9Z0P5_9ORYZ; Uncharacterized protein
STRINGOGLUM02G39710.11e-89(Oryza glumipatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP40173072
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35900.11e-10bZIP family protein