PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM03G14700.1
Organism
Oryza glumaepatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 172aa    MW: 19040.8 Da    PI: 5.8395
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM03G14700.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.17e-122281362
                     XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1  3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62
                     e +   rk +NR++A+rsR +K+++++ L+ +v++L  eN+a++  +    + +  +++e
  OGLUM03G14700.1 22 EERQRNRKRSNRLSAQRSRMKKQQYVDGLAVEVEQLRRENDAMRAGAGAVLQRCRLVEQE 81
                     444455888***********************************9887777777666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.8E-111767No hitNo description
SMARTSM003382.3E-131984IPR004827Basic-leucine zipper domain
PfamPF001709.0E-92170IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.9442265IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.59E-92474No hitNo description
PROSITE patternPS0003602842IPR004827Basic-leucine zipper domain
CDDcd147025.18E-142976No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    Send to blast
MSVAPATEGS ARRSAAAAEE EEERQRNRKR SNRLSAQRSR MKKQQYVDGL AVEVEQLRRE  60
NDAMRAGAGA VLQRCRLVEQ ENRVLAAHAR ELCSALQLRA SQLRLLGEVA GMPLDVPDVA  120
DHLVQLYGGD LGMTPLSPPP LLPPLPPQIE MLFFQPDSVM DPVSMLQGYE NI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126110.0CP012611.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 3 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015631799.19e-92ocs element-binding factor 1
TrEMBLA0A0D9Z6681e-119A0A0D9Z668_9ORYZ; Uncharacterized protein
STRINGOGLUM03G14700.11e-120(Oryza glumipatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP125042837
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.18e-10basic leucine-zipper 44