PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM06G29160.1
Organism
Oryza glumaepatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 124aa    MW: 13528.1 Da    PI: 8.481
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM06G29160.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_127.85.5e-0991116328
                      XXCHHHCHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   3 elkrerrkqkNReAArrsRqRKkaei 28 
                      +++r++r+++NRe+A rsR+RK+ +i
  OGLUM06G29160.1  91 DDRRTIRMMRNRESALRSRARKRVRI 116
                      589*******************9887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.5E-589116No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 124 aa     Download sequence    Send to blast
MANYHHQEYY QMAAAVAWPR EPDSPQLSIM SGCSSLFSIS TLRDDDDGVR LAGAALPATP  60
VSLAGIAGGA STPGGDEVDM EVRQQSGGSG DDRRTIRMMR NRESALRSRA RKRVRIRIYD  120
TNTV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1106116RSRARKRVRIR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC0917741e-172AC091774.7 Oryza sativa chromosome 6 BAC OJ1540_H01 genomic sequence, complete sequence.
GenBankAK2892591e-172AK289259.1 Oryza sativa Japonica Group cDNA, clone: J100084H14, full insert sequence.
GenBankAP0037691e-172AP003769.3 Oryza sativa Japonica Group genomic DNA, chromosome 6, PAC clone:P0541C02.
GenBankAP0060651e-172AP006065.2 Oryza sativa Japonica Group genomic DNA, chromosome 6, BAC clone:OSJNBa0076I16.
GenBankAP0072311e-172AP007231.2 Oryza sativa Japonica Group genomic DNA, chromosome 6, PAC clone:P0535F09.
GenBankAP0149621e-172AP014962.1 Oryza sativa Japonica Group DNA, chromosome 6, cultivar: Nipponbare, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015642449.16e-71ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
RefseqXP_015643092.16e-71ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
RefseqXP_015643093.16e-71ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
RefseqXP_015643094.16e-71ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
RefseqXP_015643106.16e-71ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
RefseqXP_015643107.16e-71ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
TrEMBLA0A0E0AEI93e-85A0A0E0AEI9_9ORYZ; Uncharacterized protein
STRINGOGLUM06G29160.15e-86(Oryza glumipatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP40173072