PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM08G04900.1
Organism
Oryza glumaepatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 402aa    MW: 44041.6 Da    PI: 7.2016
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM08G04900.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.83.5e-1194126234
                      XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeek 34 
                      +++k +rr+++NReAAr+sR+RKka+i++Le+ 
  OGLUM08G04900.1  94 PRDKIQRRLAQNREAARKSRLRKKAYIQNLETS 126
                      57999*************************974 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.2E-593156IPR004827Basic-leucine zipper domain
PfamPF001705.2E-895130IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.53195137IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.31E-797141No hitNo description
Gene3DG3DSA:1.20.5.1703.3E-898143No hitNo description
PROSITE patternPS000360100115IPR004827Basic-leucine zipper domain
PfamPF141441.3E-27182257IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 402 aa     Download sequence    Send to blast
MRERDASSPL AGRGAGESSS GLFRAPYPLN RTSSDTSNAA AAAMVVAPPP LTEPKFESQL  60
ALPLQHGDDQ DDAAALQESP RHASDSFEQE ASKPRDKIQR RLAQNREAAR KSRLRKKAYI  120
QNLETSRMKL AHLEQEITRA RQQGAYINRS SNPATLPAPI DSGVVTFEVE YAQWVEEQGR  180
QTAELRAALQ AAAAEGPELR AAVEAALAHY DRLFAAKREA ARRDVFFVMS GVWRTGAERF  240
FLWIAGFRPS EVIRVLAPQL EPMTERQAAD VRGLQQKARH LEDALSQGMD KLKQTLADSL  300
LAEAVVVSTS CDASPPPEEE PSSSAAGDGG CYMAQMGSAM GRLSNLVAFV DHADHLRQET  360
LQNMYKILTL PQAARGLLAL GDYCQRLRAL SSLWAARPRE PA
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCT8315140.0CT831514.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA129B22, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025883355.10.0transcription factor TGAL10-like isoform X3
RefseqXP_025883356.10.0transcription factor TGAL10-like isoform X3
SwissprotQ6ZBS80.0TGL10_ORYSJ; Transcription factor TGAL10
TrEMBLA0A0E0ARI20.0A0A0E0ARI2_9ORYZ; Uncharacterized protein
STRINGOGLUM08G04900.10.0(Oryza glumipatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP35713877
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10030.21e-108TGACG motif-binding factor 4
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]