 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
OMERI02G10250.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
GATA |
| Protein Properties |
Length: 347aa MW: 37123.3 Da PI: 9.898 |
| Description |
GATA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OMERI02G10250.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 54.7 | 1.3e-17 | 176 | 209 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
Cs C+ttkTplWR+gp g+k+LCnaCG+++rk +
OMERI02G10250.1 176 CSDCNTTKTPLWRSGPCGPKSLCNACGIRQRKAR 209
*******************************987 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0007623 | Biological Process | circadian rhythm |
| GO:0009416 | Biological Process | response to light stimulus |
| GO:0009735 | Biological Process | response to cytokinin |
| GO:0009740 | Biological Process | gibberellic acid mediated signaling pathway |
| GO:0009910 | Biological Process | negative regulation of flower development |
| GO:0010187 | Biological Process | negative regulation of seed germination |
| GO:0010380 | Biological Process | regulation of chlorophyll biosynthetic process |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 347 aa
Download sequence Send
to blast |
MSTIYMSQLP ATLPLMEGDQ DQGLYPAFHR AKDPPILFPF MIDSAVEHQG QSYGDQGLRR 60
QQVLGESNQQ FNDHMMMGGS DVFLAPFRPT IQSIGSDMIQ RSSYDPYDIE SNNKQHANGS 120
TSKWMSTPPV KMRIIRKGAA TDPEGGAVRK PRRRAQAHQD ESQQQQQQAL GVVRVCSDCN 180
TTKTPLWRSG PCGPKSLCNA CGIRQRKARR AMAAAANGGA AVSSAKSVTA APVNNKPAAK 240
KEKRAADVDR SLPFKKRCKM VDHVAAAVAA TKPTAAGEVV AAAPKKDQDH VIVVGGENAA 300
AIAPAQNPIS KAAAVAASPA FFHGLPRDEI TDAAMLLMTL SCGLVHS
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters (By similarity). Influences the expression of nuclear encoded chloroplast-targeted genes. Regulates chloroplast development and promotes chlorophyll accumulation. Modulates plant architecture (e.g. height, length and width of leaf blades, and flowering tillers production) and represses tillering, probably by modulating number of cells. Promotes senescence. Involved in grain filling, panicle development and starch production (PubMed:23548780). {ECO:0000250|UniProtKB:Q9SZI6, ECO:0000269|PubMed:23548780}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by light, nitrogen, and cytokinin (benzyladenine) treatments, but repressed by darkness and gibberellin (GA). {ECO:0000269|PubMed:23548780}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK099607 | 0.0 | AK099607.1 Oryza sativa Japonica Group cDNA clone:J013048G01, full insert sequence. |
