PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMERI02G27540.1
Organism
Oryza meridionalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family EIL
Protein Properties Length: 336aa    MW: 35134 Da    PI: 10.7532
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMERI02G27540.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN371.62.1e-2219724969121
                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
             EIN3  69 aqGfvYgiipekgkpvegasdsLraWWkekvefdrngpaaiskyqaknlilsg 121
                      a GfvYgiipekgkpv++asd+Lr+ Wkekv+f rngpaai+kyqa+nl+++ 
  OMERI02G27540.1 197 AVGFVYGIIPEKGKPVSSASDNLRSCWKEKVRFVRNGPAAIAKYQADNLLATM 249
                      67***********************************************9875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048738.8E-24197249No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    Send to blast
MSFLPPPLSP LLCATPPCSS SAAPPSSTAL PESTSKPPAS SSRSASSSTH SPAGSRPPSL  60
PATSTLSSCT RCSSSSSSSS TPPAPNSAAR VWCMTASWPS PASAARDCSA DLSCNGQACG  120
PVAGNFKGSY LAMLSSGALV FGIINIVGNF GTVFVENGYW MPPASSQADT PCVEVCRAQL  180
WLLPGGPRRG LVVLNIAVGF VYGIIPEKGK PVSSASDNLR SCWKEKVRFV RNGPAAIAKY  240
QADNLLATMP CRGATATSAA PRWQGRTSCT SCRTPRWVRC SRRSCSTATS RSAAFCLRRA  300
CRRHGGPNPS CPHHRGPRPR FHRPPRRPPT STASSP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAY4636910.0AY463691.1 Oryza sativa (japonica cultivar-group) DUR3 (OSJNBa0056G17.4) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0E0CPZ40.0A0A0E0CPZ4_9ORYZ; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27050.11e-19ETHYLENE-INSENSITIVE3-like 1