PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMERI05G02190.1
Organism
Oryza meridionalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family EIL
Protein Properties Length: 172aa    MW: 18687.9 Da    PI: 10.8435
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMERI05G02190.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN337.93.7e-121276490
                     XXXXXXXXXXXXXXXXXXXXXXXXXXX CS
             EIN3 64 mevcnaqGfvYgiipekgkpvegasds 90
                     mevcnaqGfvYgiipekgkpv++asd+
  OMERI05G02190.1  1 MEVCNAQGFVYGIIPEKGKPVSSASDN 27
                     9*************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048732.0E-12127No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    Send to blast
MEVCNAQGFV YGIIPEKGKP VSSASDNGDA LYSSTRLRLL ALRVSSTPPR PSAESADRGL  60
SELVVHLHRS GFPAPSPWSP STDHAHCLTV ITPPCRRIGE EKEAGRLGRR RRRRGSQPCS  120
SATWGRRGRG EAGGKRQGGR GGVGEEDGEV GELFCSARRR SSRYSRPPYF NV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1105113RLGRRRRRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1305980.0AC130598.2 Oryza sativa Japonica Group cultivar Nipponbare chromosome 5 clone OSJNBa0056I11, complete sequence.
GenBankAP0149610.0AP014961.1 Oryza sativa Japonica Group DNA, chromosome 5, cultivar: Nipponbare, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0E0DLI81e-119A0A0E0DLI8_9ORYZ; Uncharacterized protein
STRINGORUFI01G07920.11e-18(Oryza rufipogon)
STRINGONIVA01G09400.11e-18(Oryza nivara)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27050.11e-10ETHYLENE-INSENSITIVE3-like 1