PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMERI06G21830.1

Organism

Oryza meridionalis

Taxonomic ID

40149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 162aa MW: 17012.8 Da PI: 10.6812

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMERI06G21830.1	genome	OGE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	38.5	2.4e-12	62	122	3	63
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 + ++err+++NRe+ArrsR R++ +++eL v+eL a N++L+ el++ a++ e+ OMERI06G21830.1 62 DERKERRLASNRESARRSRVRRRRQLDELSSHVAELRAANHRLAVELNRAAARHAQMAREN 122 6689********************************************9998888887765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.3E-8	60	110	No hit	No description
SMART	SM00338	3.5E-7	60	124	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.622	62	125	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.2E-9	63	122	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.34E-7	64	112	No hit	No description
PROSITE pattern	PS00036	0	67	82	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 162 aa Download sequence Send to blast
MAYQSFGAVD LAASFFFSSS SSSPQPGLVG VHGDRFLAAA GGGGGDGGGD GGAASGKGTR 60 RDERKERRLA SNRESARRSR VRRRRQLDEL SSHVAELRAA NHRLAVELNR AAARHAQMAR 120 ENARLAEEAR ALRERLLRGG GGEAEEEAGG GCGAEAILAP MD

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	CP012614	0.0	CP012614.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 6 sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A0E0E406	1e-105	A0A0E0E406_9ORYZ; Uncharacterized protein
STRING	OMERI06G20250.1	1e-106	(Oryza meridionalis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP20480	8	8