PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMERI07G01350.1
Organism
Oryza meridionalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 166aa    MW: 17865 Da    PI: 12.4795
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMERI07G01350.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_128.33.7e-091457447
                     XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47
                      +r rrk++NRe+Arrs  RK+  ++eL+ +++ L   N++L+ 
  OMERI07G01350.1 14 ERRLRRKISNRESARRSGTRKQRHLDELRARADRLRRCNRELAA 57
                     5899***********************************99975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.4E-6657No hitNo description
SMARTSM003381.3E-41174IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.1171358IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.58E-61558No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    Send to blast
MTTQPPEREA SADERRLRRK ISNRESARRS GTRKQRHLDE LRARADRLRR CNRELAARGH  60
AARGRAGLAG GGRRGLGWRA PRPRLAGAEE RPEAGAEASA GGRRGLGWRA RRRGRLRATR  120
SGSSAAGRSV ARAISASAVG CSGELHLCRR PSSACASSSA VDRPSA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC0798303e-91AC079830.9 Oryza sativa chromosome 3 BAC OSJNBb0009F04 genomic sequence, complete sequence.
GenBankAP0149593e-91AP014959.1 Oryza sativa Japonica Group DNA, chromosome 3, cultivar: Nipponbare, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0E0E7A01e-103A0A0E0E7A0_9ORYZ; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2721145