PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMERI08G17680.1
Organism
Oryza meridionalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 141aa    MW: 15165.9 Da    PI: 9.765
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMERI08G17680.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_151.52.1e-1668123560
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 
                      +r rr++kNRe+A rsR+RK+a+++eLe++v  L aeN aL+ +  +lk  +a+ +
  OMERI08G17680.1  68 RRKRRAMKNRESAERSRARKQAYLQELEQEVRLLRAENAALRHQCHQLKAAAAEAE 123
                      799**********************************************9988765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.6E-1164128IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.64566116IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.44E-1168117No hitNo description
PfamPF001701.1E-1368118IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.6E-1368121No hitNo description
CDDcd147077.66E-1568115No hitNo description
PROSITE patternPS0003607186IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 141 aa     Download sequence    Send to blast
MERAAGSGGD AEELVLPPAS FQDGLPSSRS CIGGGAAAAA SALERELLYR AELHQQQQQL  60
GGGGGAERRK RRAMKNRESA ERSRARKQAY LQELEQEVRL LRAENAALRH QCHQLKAAAA  120
EAEAEAAAKK PTIQRTSSAT F
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCT8360231e-148CT836023.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN045B18, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015649649.12e-54protein ABSCISIC ACID-INSENSITIVE 5
TrEMBLA0A0E0ENQ92e-92A0A0E0ENQ9_9ORYZ; Uncharacterized protein
STRINGOMERI08G17470.13e-93(Oryza meridionalis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP151931719
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36270.19e-08bZIP family protein