PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMERI11G15370.1
Organism
Oryza meridionalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 165aa    MW: 18664.3 Da    PI: 5.9696
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMERI11G15370.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM23.41.6e-076014438128
              NAM  38 diykvePwdLpk.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgk.dkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                      ++  ++Pw+Lp+  +k++ +    +   ++  a+ ++     ++  W        ++  ++   +g+kk+L f k  ++k   t Wvm ey+l
  OMERI11G15370.1  60 HLDGMKPWELPEcFIKTGPT--IPWNAVNRCRANPSQG----QQEAWTPVKDaLSAIRGTNAGYIGMKKVLEFLKDGTKK--TTGWVMVEYSL 144
                      56667888888513333322..2222222222222222....2335886655145666668888**********655555..8********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.06E-961152IPR003441NAC domain
PfamPF023653.5E-596144IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    Send to blast
MGNEELRSLN QEIKIYTNPS ISTANDVNTL KYLLEEAELY LSKMEEMGLT DFSSLRVNSH  60
LDGMKPWELP ECFIKTGPTI PWNAVNRCRA NPSQGQQEAW TPVKDALSAI RGTNAGYIGM  120
KKVLEFLKDG TKKTTGWVMV EYSLLRKFAN DNTNASYVDV RFMVS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0E0F7B41e-120A0A0E0F7B4_9ORYZ; Uncharacterized protein
STRINGOMERI11G15170.11e-121(Oryza meridionalis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP15166411