PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA02G07280.1
Organism
Oryza nivara
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 238aa    MW: 24824.9 Da    PI: 10.3722
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA02G07280.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_123.41.3e-071371792163
                      HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1  21 RqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                      R RKk+++ e ++ v +L  eN++L++e+ +l+  +a+l +e+
  ONIVA02G07280.1 137 RPRKKMRLPEVQQLVRSLAVENDSLREEMRTLQRACAALSKEN 179
                      89*************************************9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    Send to blast
MDCAGDDDAV AAGIICSLRG ADLAGKGAAR EELIWPPVTR GKRSRRRSPS AVAAAAGKKG  60
RWARASPASP LDYSGGSGSG SGSGSGSAAS TSGGEDGAFC SPPGHRPAPA TTKVSAMGRQ  120
QQLPFSAPSP LRPAGQRPRK KMRLPEVQQL VRSLAVENDS LREEMRTLQR ACAALSKEND  180
KLEIRLQISS SRNKPMITED LKGKQQIDQQ SATQSIGGSF ALPDLNIPVQ DAADGSVH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1136142RPRKKMR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1076300.0AK107630.1 Oryza sativa Japonica Group cDNA clone:002-131-E03, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015626239.11e-144uncharacterized protein LOC4328519 isoform X1
TrEMBLA0A0E0G2L91e-169A0A0E0G2L9_ORYNI; Uncharacterized protein
STRINGONIVA02G07280.21e-145(Oryza nivara)