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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
ONIVA02G08330.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
ERF |
| Protein Properties |
Length: 230aa MW: 24587.9 Da PI: 8.3022 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| ONIVA02G08330.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 23.1 | 1.8e-07 | 15 | 36 | 2 | 24 |
AP2 2 gykGVrwdkkrgrWvAeIrdpse 24
+++GVr ++ +gr++AeIrdp +
ONIVA02G08330.1 15 RFRGVRKRP-WGRYAAEIRDPAK 36
69*******.**********854 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 230 aa
Download sequence Send
to blast |
MRRGGAAEED AEAARFRGVR KRPWGRYAAE IRDPAKKARA KTNFPLSLPH AQPQLHHHHH 60
HHLTYPAAAV VAARPATSSL SSTVESFGTR PRPVLPPRPP PPPPILDGDC RSDCGSSASV 120
VDDDCADAAA SPSCRLPFQF DLNLPPGGGG GFGLGVDSNL LHEPNGAIMG KDKVLLVALV 180
PTDPATDYPL VYPVVKCNMS RLWGNKYAAA PDLARHCLLT STQEQSFPCA
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Probably acts as a transcriptional repressor and may regulate other AtERFs (By similarity). {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP004046 | 0.0 | AP004046.2 Oryza sativa Japonica Group genomic DNA, chromosome 2, BAC clone:OJ1145_F01. |
| GenBank | AP005849 | 0.0 | AP005849.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, BAC clone:OSJNBb0031B09. |
| GenBank | AP014958 | 0.0 | AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence. |
