PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA03G07430.1

Organism

Oryza nivara

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 168aa MW: 18031.4 Da PI: 11.5288

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA03G07430.1	genome	OGE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	33.2	1.2e-10	60	108	1	49
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 e++++r rr+++NRe+ArrsR+RK+ ++eL+ k+ +L a ++L +l ONIVA03G07430.1 60 EERRRRLRRRISNRESARRSRARKQRHLDELRAKASALRATSRDLVARL 108 68899**********************************9999988766 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	6.2E-7	56	109	No hit	No description
SMART	SM00338	1.9E-7	58	124	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	4.3E-7	60	108	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.53	62	108	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	2.88E-8	64	109	No hit	No description
PROSITE pattern	PS00036	0	67	82	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 168 aa Download sequence Send to blast
MAGLPFPSDS DTALEAFLAD IGFGAPCPEA APEPSPSHPD TTAAAATDEP VMAGDDQADE 60 ERRRRLRRRI SNRESARRSR ARKQRHLDEL RAKASALRAT SRDLVARLRG ARARAALVAL 120 TNAHLRDEAG KLARRLAAAR RVIALRQLYS AAAAGGGFEM QALASLIA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	76	83	RRSRARKQ

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	CP012620	0.0	CP012620.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 12 sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015619047.1	1e-108	ocs element-binding factor 1
TrEMBL	A0A0E0GIA9	1e-110	A0A0E0GIA9_ORYNI; Uncharacterized protein
STRING	ONIVA03G07430.1	1e-111	(Oryza nivara)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP15125	19	19