PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA05G21900.1
Organism
Oryza nivara
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 401aa    MW: 44784.6 Da    PI: 9.6266
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA05G21900.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.61.7e-10116157546
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                      k  rr+++NReAAr+sR+RKka++++Le+   +L++  ++L+
  ONIVA05G21900.1 116 KTLRRLAQNREAARKSRLRKKAYVQQLEDSRMKLTQLEQELQ 157
                      6789************************99888888776654 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.9E-7112181IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.094114158IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.3E-7116159No hitNo description
PfamPF001701.2E-7116157IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.5E-8117161No hitNo description
PROSITE patternPS000360119134IPR004827Basic-leucine zipper domain
PfamPF141441.8E-30198273IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 401 aa     Download sequence    Send to blast
MFVASSPRKC PQGPCQAART ANQLQPGTSG SHRIDSMLGF AAESARRIRS ARHTNFSRLL  60
ISAQAQEFNM VYASPGTDAS TDPDIDKNIR MFEQGDFPTP LASYPTDKSK GKLGQKTLRR  120
LAQNREAARK SRLRKKAYVQ QLEDSRMKLT QLEQELQRAR QQGIIISTSG DQQRSTSENE  180
ALAFNMEYMR WLEEHNKQIN ELRSAVHTHA GDDDLQSIVS NFMAHHEEIF RIKGLAAKAD  240
ALHVLSATWR TPLERCFLWL GGFRPSDLLK LLADQLEPLT EQQLASICNQ QQSSQEAEET  300
LSQGMEIIQD SLAKTVASQL GRAGSSSSSP SNAADHTAAA LGKIGAMESL LQQADDMRMQ  360
SLQKMQRVLT TRQSARALLL ISDYFSRLRA LNSLWIARPQ Q
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126131e-150CP012613.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 5 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025881449.10.0transcription factor TGAL1-like isoform X1
SwissprotQ415581e-157HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A0E0HG870.0A0A0E0HG87_ORYNI; Uncharacterized protein
STRINGONIVA05G21900.10.0(Oryza nivara)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP169461111
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-125bZIP family protein