PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA06G30250.1
Organism
Oryza nivara
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 224aa    MW: 24478.4 Da    PI: 9.1333
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA06G30250.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.61.6e-14175220348
                      XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                      +++r++r+++NRe+A rsR+RK+a++eeLe++v  L   N  Lkk+
  ONIVA06G30250.1 175 DDRRTIRMMRNRESALRSRARKRAYVEELEKEVRRLVDDNLNLKKQ 220
                      589*************************************877764 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.3E-5173223IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.5E-12173221No hitNo description
PROSITE profilePS5021710.427175220IPR004827Basic-leucine zipper domain
PfamPF001706.3E-12176220IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.25E-10177221No hitNo description
CDDcd147079.52E-17177221No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    Send to blast
MVTVTEAAGR RVQEQVQFEG GLQVGFINPK HPERERERER ERARDKLSNN NQKQGALTAA  60
VGDRIKDPAA TSKKVQVQGA AMANYHHQEY YQMAAAAAVA WPREPDSPQL SIMSGCSSLF  120
SISTLRDDDG GGVRLAGAAL PATPVSLAGI AGGASTPGGD EVDMEVRQQS GGSGDDRRTI  180
RMMRNRESAL RSRARKRAYV EELEKEVRRL VDDNLNLKKQ CMAD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13345RERERERERARDK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCT8347450.0CT834745.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA103J07, full insert sequence.
GenBankCT8347470.0CT834747.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA126G01, full insert sequence.
GenBankCT8347480.0CT834748.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA223H09, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015642449.17e-93ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
RefseqXP_015643092.17e-93ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
RefseqXP_015643093.17e-93ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
RefseqXP_015643094.17e-93ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
RefseqXP_015643106.17e-93ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
RefseqXP_015643107.17e-93ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
TrEMBLA0A0E0HVH91e-163A0A0E0HVH9_ORYNI; Uncharacterized protein
STRINGONIVA06G30250.11e-164(Oryza nivara)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP40173072
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G45249.15e-06abscisic acid responsive elements-binding factor 2