PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA07G00570.1

Organism

Oryza nivara

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 187aa MW: 19604.9 Da PI: 11.2135

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA07G00570.1	genome	OGE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	41.3	3.4e-13	68	118	1	51
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 e++++r rrk++NRe+ArrsR+R+++++eeLe+ ++eL ae++aL+++l+ ONIVA07G00570.1 68 EERRRRLRRKISNRESARRSRARRRQRVEELERAADELRAERRALASRLDA 118 68899*******************************************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	3.4E-10	67	119	No hit	No description
SMART	SM00338	2.1E-7	68	132	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.7E-8	68	118	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.013	70	133	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	9.64E-8	72	123	No hit	No description
PROSITE pattern	PS00036	0	75	90	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 187 aa Download sequence Send to blast
MPLDFGLPDM DVGFGFFGVD AVAFGYDGVA SDAAAGLSPV VGAGDGSGGG GDVLLYCDGG 60 GGGEDGEEER RRRLRRKISN RESARRSRAR RRQRVEELER AADELRAERR ALASRLDATA 120 RRALAVRGAN ARHHAEAGVL RRRLGEAQRN AAVLIGLSRL LRSTANGAHG GAAPAQLSNG 180 GVASLMT

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	CP012615	0.0	CP012615.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 7 sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A0E0HW82	1e-123	A0A0E0HW82_ORYNI; Uncharacterized protein
STRING	ONIVA07G00570.1	1e-123	(Oryza nivara)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP16831	9	9