 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
ONIVA07G19060.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
GRAS |
| Protein Properties |
Length: 472aa MW: 50451.3 Da PI: 5.2589 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| ONIVA07G19060.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 293.9 | 4.3e-90 | 76 | 469 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn....sseelaalkl..fsevsP 89
++lL++cA+a++++d++l+q++L+ l+++a dgd++qRl+a f+ AL +r +r ++ +ka+++ ++ + ++++++a++l f +++P
ONIVA07G19060.1 76 EQLLVHCANAIEANDATLTQQILWVLNNIAPADGDSNQRLTAAFLCALVSRASR--TGACKAVTAAVADAVEsaalHVHRFTAVELasFIDLTP 167
79***************************************************9..44454443333322221234666666666689****** PP
GRAS 90 ilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg....skeeleetgerLakfAeelgvpfefn 179
+++f++ +aN aI+eaveg vHi+D++ ++++Q p+L++ La R+egpp lR+T+ + + s +ee+g +L +fA++ +++++f+
ONIVA07G19060.1 168 WHRFGYTAANAAIVEAVEGFPVVHIVDLSTTHCMQIPTLIDMLAGRAEGPPILRLTVADVAPSApppaLDMPYEELGAKLVNFARSRNMSMDFR 261
*********************************************************9886666787777789********************* PP
GRAS 180 vl.......vakrledleleeLrvkpgEalaVnlvlqlhrlldesvsles.........erdevLklvkslsPkvvvvveqeadhnsesFlerf 257
v+ +++ +++l++++L + gEal+Vn+++ lh+++de++ + s r+ +Lk ++ l P++vvvv+++ad ++++ + r+
ONIVA07G19060.1 262 VVptspadaLTSLVDQLRVQQLVSDGGEALVVNCHMLLHTVPDETAGSVSlttaqppvsLRTMLLKSLRALDPTLVVVVDEDADFTAGDVVGRL 355
**887666555566677777777777****************887665555445566657899******************************* PP
GRAS 258 lealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrv 351
a+++ + +d++++ l + se+r+++E+e +g++++nv+a+eg er+er+e ++W +r+++aGF++++++e+aa ++k++l+ ++ g+ +
ONIVA07G19060.1 356 RAAFNFLWIPYDAVDTFLLKGSEQRRWYEAE-VGWKVENVLAQEGVERVERQEDRARWGQRMRAAGFRAAAFGEEAAGEVKAMLNDHA-AGWGM 447
*******************************.********************************************************.88999 PP
GRAS 352 eeesgslvlgWkdrpLvsvSaW 373
+ e++ lvl+Wk++++v++SaW
ONIVA07G19060.1 448 KREDDDLVLTWKGHNVVFASAW 469
9********************* PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 472 aa
Download sequence Send
to blast |
MQFTHTAPPP PPLHPNGHGL GLGLYLDVGA TRGGGGARPW SSSSSTTTLG GSGYFPSSAA 60
ASKISLGNLN STGCMEQLLV HCANAIEAND ATLTQQILWV LNNIAPADGD SNQRLTAAFL 120
CALVSRASRT GACKAVTAAV ADAVESAALH VHRFTAVELA SFIDLTPWHR FGYTAANAAI 180
VEAVEGFPVV HIVDLSTTHC MQIPTLIDML AGRAEGPPIL RLTVADVAPS APPPALDMPY 240
EELGAKLVNF ARSRNMSMDF RVVPTSPADA LTSLVDQLRV QQLVSDGGEA LVVNCHMLLH 300
TVPDETAGSV SLTTAQPPVS LRTMLLKSLR ALDPTLVVVV DEDADFTAGD VVGRLRAAFN 360
FLWIPYDAVD TFLLKGSEQR RWYEAEVGWK VENVLAQEGV ERVERQEDRA RWGQRMRAAG 420
FRAAAFGEEA AGEVKAMLND HAAGWGMKRE DDDLVLTWKG HNVVFASAWA PS
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | CP012615 | 0.0 | CP012615.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 7 sequence. |
