PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA10G01340.1
Organism
Oryza nivara
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 132aa    MW: 14520.3 Da    PI: 12.1647
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA10G01340.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_128.92.6e-095497346
                     XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1  3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46
                     + +r rrk++NRe+A rsR+ K+  ++eL+ ++  L   N +L+
  ONIVA10G01340.1 54 DERRFRRKISNRESACRSRAHKQWHLDELRARAGWLRRCNCELA 97
                     56899***************************998888887765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.7E-74998No hitNo description
SMARTSM003380.00452116IPR004827Basic-leucine zipper domain
PfamPF001701.6E-65697IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.22E-75699No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    Send to blast
MRREGGGGGE ARRRWRRRRA AAGCGGGGER GGRGGKRGGS GDQPPEREAE ADADERRFRR  60
KISNRESACR SRAHKQWHLD ELRARAGWLR RCNCELAARG HAARGRAGLV HLTNMQLRAK  120
AATPAAPFPA CR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126181e-140CP012618.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 10 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0E0IP621e-83A0A0E0IP62_ORYNI; Uncharacterized protein
STRINGONIVA10G01340.12e-84(Oryza nivara)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2721145
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15830.16e-07basic leucine-zipper 3