PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA12G04990.1
Organism
Oryza nivara
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 369aa    MW: 40421.8 Da    PI: 9.8229
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA12G04990.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_122.82e-072372691749
                      HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1  17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 
                      A+rsR RK+++i+eLe++v++L++e  +   e+
  ONIVA12G04990.1 237 AQRSRVRKLQYIAELERRVQALQTEGVEVSAEM 269
                      89*********************9977666665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.3E-6226285IPR004827Basic-leucine zipper domain
CDDcd147036.27E-16227277No hitNo description
SuperFamilySSF579595.46E-6236279No hitNo description
Gene3DG3DSA:1.20.5.1701.2E-6237291No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    Send to blast
MMANARFQKQ ALLPPRSPFP AAVGAAPSPS PHAELGPIAR PRDAPHRHGH QRTSSESVLI  60
DEQPSWLDDL LDEPEAPARP HGRPGHRRSS SDSFTLFDGG ASAAAAGMYD NVFDGMRGRG  120
GGGQQVGSWG AAPEFFPEQS SFGRPQGQGG RPWDSRLMLR QGGGGGGGMP VPMNGGHHGP  180
PSAFGDHGHG SLPNGVDRKG PGDSAHDQRM GAERKEGAHL RHSQSEADTK RAKQQYAQRS  240
RVRKLQYIAE LERRVQALQT EGVEVSAEMD FLGQQNIMLD LENKALKQRL ESLSQEHLIK  300
RFQQEMFERE IGRLRSLFQQ QQQQQHIPQQ QGPTHSRSNS RDLDSQFANM SLKHGDPNSG  360
RDAVPGLRI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2875550.0AK287555.1 Oryza sativa Japonica Group cDNA, clone: J065019F14, full insert sequence.
GenBankAK2877160.0AK287716.1 Oryza sativa Japonica Group cDNA, clone: J065134G21, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015618309.10.0uncharacterized protein At4g06598
RefseqXP_025877630.10.0uncharacterized protein At4g06598
TrEMBLA0A0E0J7P80.0A0A0E0J7P8_ORYNI; Uncharacterized protein
STRINGONIVA12G04990.10.0(Oryza nivara)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP33103666
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.29e-48bZIP family protein