PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC01G04820.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family BES1
Protein Properties Length: 137aa    MW: 15213 Da    PI: 10.6483
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC01G04820.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822112.28.2e-35151265112
           DUF822   5 rkptwkEr..EnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl.eeaeaagssasaspesslq 95 
                      rk+ ++ r   + + R RrRR +a++iyaGLRa ++y lpk+aD+n+Vl+ALc+eAG++v+dDG++ r+++++l  + + +g s+++ + ss++
  OPUNC01G04820.1  15 RKRAARRRwwQRRRGRRRRRRGVATRIYAGLRAGAGYTLPKHADQNDVLRALCAEAGYLVDDDGNVSRRHDERLaGAGAGGGGSSDQLQVSSYS 108
                      5555555511345556778899****************************************************999999************** PP

           DUF822  96 .sslkssalaspvesysa 112
                        +  + a++ + ++++ 
  OPUNC01G04820.1 109 gATEAAVAIQHQEQEQEI 126
                      777777777777666655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056874.1E-2418118IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    Send to blast
MEGAVPMGQQ LARERKRAAR RRWWQRRRGR RRRRRGVATR IYAGLRAGAG YTLPKHADQN  60
DVLRALCAEA GYLVDDDGNV SRRHDERLAG AGAGGGGSSD QLQVSSYSGA TEAAVAIQHQ  120
EQEQEISLEL TLSFTYM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A4e-133694391449Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B4e-133694391449Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C4e-133694391449Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D4e-133694391449Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11934RRRWWQRRRGRRRRRR
22430QRRRGRR
32633RRGRRRRR
42634RRGRRRRRR
52734RGRRRRRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0025231e-77AP002523.1 Oryza sativa Japonica Group genomic DNA, chromosome 1, PAC clone:P0013F10.
GenBankAP0149571e-77AP014957.1 Oryza sativa Japonica Group DNA, chromosome 1, cultivar: Nipponbare, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025879038.11e-57BES1/BZR1 homolog protein 4-like
TrEMBLA0A0E0JET35e-93A0A0E0JET3_ORYPU; Uncharacterized protein
STRINGOPUNC01G04820.19e-94(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP132013032
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19350.31e-14BES1 family protein