PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC01G05440.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 516aa    MW: 53282.4 Da    PI: 6.5084
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC01G05440.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.81.3e-29251310159
                      ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      ++Dg++WrKYGqK  kg+++pr+YYrCt a +Cpv+k+v+r+a+d +++++tYeg+H h+
  OPUNC01G05440.1 251 MNDGCQWRKYGQKISKGNPCPRAYYRCTVApNCPVRKQVQRCADDMSILITTYEGTHSHP 310
                      58***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.5E-31236312IPR003657WRKY domain
SuperFamilySSF1182903.4E-27244312IPR003657WRKY domain
PROSITE profilePS5081127.772246312IPR003657WRKY domain
SMARTSM007746.6E-36251311IPR003657WRKY domain
PfamPF031062.1E-26252310IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 516 aa     Download sequence    Send to blast
MDVVVESPPV REEKKVDVAA IGGAPPIVFE SFASSTQRDS TIIKKEEKME EAKAEMGEVR  60
EENERLKTML TRIVSDYQSL HMHFLDVVKV KKQTAADDKA AELAADDEAA ADDDEPDDLV  120
SLSLCTRPNA AAAAAARRKG HERTSSSSSS GGETRGDHDD GRLSLGLSCA RGVASDDDDK  180
ASRALPPMPV LNLSSDSSGD ATGAGAGEPT QPNKASRSSS GGDGADDEVL QQQQAKKARV  240
SVRVKCDTPT MNDGCQWRKY GQKISKGNPC PRAYYRCTVA PNCPVRKQVQ RCADDMSILI  300
TTYEGTHSHP LPPAAAAMAS TTSAAAAMLT SGSTTSTMHG GGAHHHLPFT SAVGGGVGLL  360
GPTTISTATS CPTVTLDLTA PHSLLHPSSS SPYAAAGYES SRALPAAWSS GYLAYGGAAA  420
QAPYYAKGVA PSPFGHHFGM MGMAAAAARP APEQLFGGQT TSPYLQRAIG GGGVAPAAVT  480
DTIAKAITSD PSFQSVLAAA ITSYMGRGGG AAAQNK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-21238314176WRKY transcription factor 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1235244KKARVSVRVK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2892400.0AK289240.1 Oryza sativa Japonica Group cDNA, clone: J100075H09, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015625260.10.0probable WRKY transcription factor 72
TrEMBLA0A0E0JF080.0A0A0E0JF08_ORYPU; Uncharacterized protein
STRINGOPUNC01G05440.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP120812938
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.12e-43WRKY DNA-binding protein 72