PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OPUNC01G06850.1

Organism

Oryza punctata

Taxonomic ID

4537

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 319aa MW: 34499.3 Da PI: 6.6593

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OPUNC01G06850.1	genome	OGE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	34.7	4e-11	185	230	5	50
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 kr +r NR +A+rsR RK+++i eLe+ v +L++e +aL ++ OPUNC01G06850.1 185 KRVKRILANRQSAQRSRVRKLQYISELERSVTSLQTEVSALSPRVA 230 8999*********************************999987765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	3.6E-14	181	245	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.76	183	239	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	5.1E-10	185	235	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.76E-11	185	239	No hit	No description
Gene3D	G3DSA:1.20.5.170	4.6E-14	185	239	No hit	No description
CDD	cd14703	2.36E-23	186	236	No hit	No description
PROSITE pattern	PS00036	0	188	203	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 319 aa Download sequence Send to blast
MAQLPPKIPT MATAWPEFGS GHHHHAAHGH HHQRSPSMGA FLAAPLPPFP LPPPAPANGG 60 AQQHHQPSWV DEFLDFSAAK RGAHRRSVSD SVAFLDPVSD DNAGVGAHDF DRLDDDQLMS 120 MFSDDLQPPP PQQQPAAPAA SASSPSDHNS MNDEKQDKGE TEEAQSECDG ATPGQPASPA 180 TVDPKRVKRI LANRQSAQRS RVRKLQYISE LERSVTSLQT EVSALSPRVA FLDHQRSLLT 240 LGNSHLKQRI AALAQDKIFK DAHQEALKKE IERLRQIYHQ QSLKNAESQP ADAAPVRGSD 300 KADLIASEGT AAAAPCPPP

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription regulator. {ECO:0000250}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Down-regulated by dehydration and salt stress. {ECO:0000269\|PubMed:18065552}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK100944	0.0	AK100944.1 Oryza sativa Japonica Group cDNA clone:J023138F18, full insert sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015635844.1	1e-175	basic leucine zipper 2
Swissprot	Q5QNI5	1e-135	BZP02_ORYSJ; Basic leucine zipper 2
TrEMBL	A0A0E0JFH5	0.0	A0A0E0JFH5_ORYPU; Uncharacterized protein
STRING	OPUNC01G06850.1	0.0	(Oryza punctata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1322	38	125

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58120.1	1e-98	bZIP family protein

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764]