PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC01G11270.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 325aa    MW: 36340.8 Da    PI: 7.798
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC01G11270.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.92.9e-104486345
                     XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1  3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
                     + k  rr+++NReAAr+sR+RKka++++Le+   +L++  ++L
  OPUNC01G11270.1 44 DQKTLRRLAQNREAARKSRLRKKAYVQQLENSRLKLTQLEQEL 86
                     56889*************************9877777766555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.5E-83689No hitNo description
SMARTSM003389.8E-842105IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.4384488IPR004827Basic-leucine zipper domain
PfamPF001702.9E-74586IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.7E-74689No hitNo description
PROSITE patternPS0003604964IPR004827Basic-leucine zipper domain
PfamPF141445.6E-33128201IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0009627Biological Processsystemic acquired resistance
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    Send to blast
MADMSPRTDT STDDTDDNHM LEPGQAALVA ASDSSDRSKD KHEDQKTLRR LAQNREAARK  60
SRLRKKAYVQ QLENSRLKLT QLEQELQRAR QQGIFISSSV DQTHSMSGNG ALAFDMEYAR  120
WLEEHNRQIN ELRSAVNAHA GDSELRGVVD KIMSHYEEIF KQKGNAAKAD VFHVLSGMWK  180
TPAERCFLWL GGFRPSELLK LEPLTEQQLS GIANLQQSSQ QAEDALSQGM EALQQSLAET  240
LAGSLGSSGS TGNVANYMGQ MAMAMGKLGT LENFLRQADN LRQQTLQQMQ RILTTRQSAR  300
ALLVISDYSS RLRALSSLWL ARPKE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00349DAPTransfer from AT3G12250Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB0512960.0AB051296.1 Oryza sativa OsNIF3 mRNA for bZIP transcription factor, complete cds.
GenBankAK2427430.0AK242743.1 Oryza sativa Japonica Group cDNA, clone: J090049N20, full insert sequence.
GenBankHM9911680.0HM991168.1 Oryza sativa Japonica Group cultivar Dongjin putative TGA2-like protein 3 mRNA, complete cds.
GenBankKM0965710.0KM096571.1 Oryza sativa Indica Group histone-binding protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006644064.10.0PREDICTED: transcription factor HBP-1b(c38) isoform X1
RefseqXP_015688196.10.0PREDICTED: transcription factor HBP-1b(c38) isoform X1
SwissprotQ0JNL30.0TGA23_ORYSJ; Transcription factor TGA2.3
TrEMBLA0A0E0JH490.0A0A0E0JH49_ORYPU; Uncharacterized protein
STRINGOPUNC01G11270.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP48638185
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-139bZIP family protein
Publications ? help Back to Top
  1. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]