PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC01G13190.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family G2-like
Protein Properties Length: 800aa    MW: 90262.4 Da    PI: 9.918
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC01G13190.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like35.22.8e-11202262154
          G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkv.......kgLtlehvkSHLQkYR 54 
                      kprl Wt eL + F+e+ e+L  +e+ +P +il+lmk+       + Lt+++v+S LQkY+
  OPUNC01G13190.1 202 KPRLIWTDELRKIFIEVYEELLLTENPVPTKILKLMKLrigstndPELTRDNVASYLQKYK 262
                      79**********************************87333333358*************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.7E-14199265IPR009057Homeodomain-like
SuperFamilySSF466892.33E-8199264IPR009057Homeodomain-like
TIGRFAMsTIGR015577.0E-9202262IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.606.5E-5614643IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 800 aa     Download sequence    Send to blast
MSSAAWPHAG GWRRSPPTAV LELPHGLVVV GDEAVQRAVV LRLGENYRAT VCSDMNVAVE  60
LLRERMKEFD FVVISEELIR SSSPRIMISL REETGLRVIV LRNEGGHEYN FEVMPNSRTE  120
KEIQLKPVRR STTNREIPHA SSSSKLSAAS PHGDSSNGST ATMVVAPAAT AVVIASSVKR  180
ATNNRRKLQR AQEQYAQHQQ RKPRLIWTDE LRKIFIEVYE ELLLTENPVP TKILKLMKLR  240
IGSTNDPELT RDNVASYLQK YKKNLLKQKD QHLPVGNNTN ISSIKIQQGS ASLQQQIMHY  300
GEYDSVNNQS LILSETGFNK HTNKQPKLLT ANCHWPRNMH HHHKNNINMQ PSNLLLRPNL  360
INAKGFNMSF SKEGVDEAIY QSQLTSHRVS ANHVVAKVGE DMHPISKYTP TSAAPPDAGS  420
RRRPPPPMLE LPHGLVVVGD EAVRRAVVAR LGVNFRATVC SEMNAAVEML RERMKEFDFV  480
VIAEEFIIRS SRPEIMKFLR EETGMRLLVL RNEGGNEYSF KVMSNSRMEE EGQLEPVRRS  540
TTNREISHAS LSSASSRLPP VPAASPHGRP TTGGNDSPLK SNLATSIGRG SQGSSGPKNC  600
ERYPVPSEIL KLMKSMIDPM NDPKLTREKI ASYLQKHKNR LKQEDQNRQN LLKQIDQQLS  660
TDDNASTSST QQQNMHYGEY DNMNNQPPIL SESRYSEHSN KQPKLLTTNY HEPRNMYHHH  720
KNIINMQPSN VVQPPNLISG KEFNMPFTKE GVDEAMHQSQ LMAHRACTNH AVATAQANWR  780
VTMISSTSTW LWNNTCEFLQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0E0JHT70.0A0A0E0JHT7_ORYPU; Uncharacterized protein
STRINGOPUNC01G13190.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1378244