PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC01G19160.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 173aa    MW: 18088.6 Da    PI: 10.0619
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC01G19160.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.31.2e-114198562
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62
                     ++ +rk++NR++A+rsR+RK+++++eL+  v++L + N aL   +      +a++ +e
  OPUNC01G19160.1 41 RKRKRKESNRLSAQRSRARKQQQLDELAGQVAALRSRNAALGLAARDAARRCAAVHAE 98
                     6789***********************************9977776666666666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.2E-1137101IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.3693981IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.1E-93981No hitNo description
PfamPF001701.3E-84081IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.5E-84182No hitNo description
CDDcd147022.48E-144281No hitNo description
PROSITE patternPS0003604459IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    Send to blast
MASPGVVSTV TPTSSAGSDQ VAAGGEARRP VAVAPAAMEE RKRKRKESNR LSAQRSRARK  60
QQQLDELAGQ VAALRSRNAA LGLAARDAAR RCAAVHAENE LLRARSVELA ARLESLTDLA  120
QCLHDAAAAS SFAAPPMMSA TAFPGAGAGA AGFMMPQPPP LLDATTMHCN YYY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14045RKRKRK
24046RKRKRKE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1105261e-161AK110526.1 Oryza sativa Japonica Group cDNA clone:002-167-H10, full insert sequence.
GenBankAP0042331e-161AP004233.3 Oryza sativa Japonica Group genomic DNA, chromosome 1, BAC clone:OSJNBa0065J17.
GenBankAP0043611e-161AP004361.4 Oryza sativa Japonica Group genomic DNA, chromosome 1, BAC clone:OSJNBa0062A24.
GenBankAP0149571e-161AP014957.1 Oryza sativa Japonica Group DNA, chromosome 1, cultivar: Nipponbare, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015641337.12e-77ocs element-binding factor 1
TrEMBLA0A0E0JJV21e-119A0A0E0JJV2_ORYPU; Uncharacterized protein
STRINGOPUNC01G19160.11e-119(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP137572428