PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC01G23440.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 341aa    MW: 36398.2 Da    PI: 6.1805
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC01G23440.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY84.41.1e-26167225259
                      --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      +D ++WrKYGqK++kgs++pr+YY+C+s  gC+++k vers   p ++++tY  +H h+
  OPUNC01G23440.1 167 SDLWAWRKYGQKPIKGSPYPRGYYKCSSMkGCMARKMVERSPAKPGMLVVTYMADHCHP 225
                      799***********************9988***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081130.125161227IPR003657WRKY domain
Gene3DG3DSA:2.20.25.804.2E-27162227IPR003657WRKY domain
SuperFamilySSF1182902.35E-24164227IPR003657WRKY domain
SMARTSM007747.6E-32166226IPR003657WRKY domain
PfamPF031062.5E-22168225IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    Send to blast
MRAPLLLRAV IVVMDHFNDW DLQAVVRSCS FPQPEPPRVG VPAAPDAAGA PVAPPARAPD  60
QMARASALYD LEYLDLDHKP FLLPGSSSSS RAVERARGED DGKSSHEVMI SFPAAAAAAS  120
TSGAQPRSPY GRKPGIRTPR PKRRSSKKSQ LKKVVYEVPV ADGGVSSDLW AWRKYGQKPI  180
KGSPYPRGYY KCSSMKGCMA RKMVERSPAK PGMLVVTYMA DHCHPVPTQL NALAGTTRHK  240
SAPTGDDDKP TSPVPAAGKA AAGEGVVLKC EDVDSSNEMS AMAADGGAED TAAAAVDDDG  300
ELWQEGMGLE LDEFLGPMDD DVFEFDHVLE EGGVLGRRLS L
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B2e-20148228280Disease resistance protein RRS1
5w3x_D2e-20148228280Disease resistance protein RRS1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1142148RRSSKKS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAY6769240.0AY676924.1 Oryza sativa (indica cultivar-group) transcription factor WRKY03 (WRKY03) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015640600.11e-170WRKY transcription factor 22
TrEMBLA0A0E0JLD10.0A0A0E0JLD1_ORYPU; Uncharacterized protein
STRINGOPUNC01G23440.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP42793070
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.12e-37WRKY family protein