PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OPUNC01G30390.2

Organism

Oryza punctata

Taxonomic ID

4537

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 218aa MW: 23221.5 Da PI: 5.8897

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OPUNC01G30390.2	genome	OGE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	33.1	1.2e-10	137	175	4	42
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeN 42 kr +r NR +A+rsR RK+++i eLe+ v +L++e OPUNC01G30390.2 137 PKRVKRILANRQSAQRSRVRKLQYISELERSVTTLQNEV 175 5999********************************996 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	4.2E-14	134	198	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.795	136	188	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	8.7E-14	138	192	No hit	No description
SuperFamily	SSF57959	3.52E-12	138	192	No hit	No description
Pfam	PF00170	5.0E-10	138	185	IPR004827	Basic-leucine zipper domain
CDD	cd14703	3.62E-25	139	190	No hit	No description
PROSITE pattern	PS00036	0	141	156	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 218 aa Download sequence Send to blast
MAQLPPKIPV AAPGHHQHWA SAGGAGDAAW ADEFAEFAAS RRGAHRRSLS DSVAFVEVAP 60 AGCGAGGEFD RLDDDQLMSM FPDEGGSSAP GSDNGGSDSD GGDKHAAAQS DDGQHAAGEP 120 TQEQAAAASP TELIRDPKRV KRILANRQSA QRSRVRKLQY ISELERSVTT LQNEVSVLSP 180 RVAFLDQQRT ILTVGNSHLK QRIAALAQDK IFKDDDRS

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription regulator. {ECO:0000250}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK108553	0.0	AK108553.1 Oryza sativa Japonica Group cDNA clone:002-144-E08, full insert sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015634100.1	1e-127	basic leucine zipper 6 isoform X1
Swissprot	Q5JMK6	1e-128	BZP06_ORYSJ; Basic leucine zipper 6
TrEMBL	A0A0E0JNV2	1e-156	A0A0E0JNV2_ORYPU; Uncharacterized protein
STRING	OGLUM01G35480.1	1e-126	(Oryza glumipatula)
STRING	OMERI01G27760.1	1e-126	(Oryza meridionalis)
STRING	ORUFI01G34500.1	1e-126	(Oryza rufipogon)
STRING	OS01T0756200-01	1e-126	(Oryza sativa)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58120.1	5e-43	bZIP family protein

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764]