PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OPUNC01G33450.1

Organism

Oryza punctata

Taxonomic ID

4537

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 599aa MW: 66156.8 Da PI: 8.4087

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OPUNC01G33450.1	genome	OGE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	30.8	6.3e-10	187	220	5	38
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeL 38 k rr+++NReAAr+sR+RKka+i++Le +L OPUNC01G33450.1 187 KTLRRLAQNREAARKSRLRKKAYIQNLESSRLKL 220 788*************************865555 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	4.2E-7	182	246	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.117	185	229	IPR004827	Basic-leucine zipper domain
CDD	cd14708	1.42E-22	187	239	No hit	No description
Pfam	PF00170	4.6E-7	187	222	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	2.4E-7	188	231	No hit	No description
SuperFamily	SSF57959	6.54E-7	188	231	No hit	No description
PROSITE pattern	PS00036	0	190	205	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	2.5E-32	269	344	IPR025422	Transcription factor TGA like domain
Pfam	PF13966	1.8E-15	463	514	IPR026960	Reverse transcriptase zinc-binding domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009410	Biological Process	response to xenobiotic stimulus
GO:0009627	Biological Process	systemic acquired resistance
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 599 aa Download sequence Send to blast
MEGGRLGGAA ASASASAAAD ARGGMSGFAA PQHAIHSNLN NMQPTQVTDF GALAQSAGFR 60 IEDLANLSTN GLFNLKSNAH TIINDPLQFG NYGKSISPSN ITTTATVTVV NPQTLVPQKG 120 AQLNLVTIRT GNIENWGESI MADTSPRTDT STDPDTDERN QMFEQGQLAA PTASDSSDRS 180 KEKLDHKTLR RLAQNREAAR KSRLRKKAYI QNLESSRLKL TQIEQELQRA RQQGIFISTS 240 SDQSHSVSGN GALAFDMEYA RWLEEHNKHI NELRAAVNAH VGDNDLRSTV DNIMAHYDEI 300 FKLKGVAAKA DVFHVLSGMW KTPAERCFMW LGGFRSSELL KLLAGQLEPL TEQQLAGIAN 360 LQQSSQQAED ALSQGMEALQ QSLAETLASG SLGPAGSSGN VANYMGQMAM AMGKLGTLEN 420 FLRQADNLRL QTLQQMQRIL TTRQSARALL AISDYFSRLR ALSSLWLAQL IRCWIADRLC 480 NRGLPHPDRC VLCDQHEESI DHILIACPKS HQLWWVALRT IGQPGCLPMN ESSFFLWFCN 540 IREKIQKSHR RGFDTIVALE RNNRVFNQQQ RKWPEVAKAM AAEAELWRLG NAAIPALRV

Sequence ? help Back to Top

Protein Sequence Length: 599 aa Download sequence Send to blast

MEGGRLGGAA ASASASAAAD ARGGMSGFAA PQHAIHSNLN NMQPTQVTDF GALAQSAGFR  60
IEDLANLSTN GLFNLKSNAH TIINDPLQFG NYGKSISPSN ITTTATVTVV NPQTLVPQKG  120
AQLNLVTIRT GNIENWGESI MADTSPRTDT STDPDTDERN QMFEQGQLAA PTASDSSDRS  180
KEKLDHKTLR RLAQNREAAR KSRLRKKAYI QNLESSRLKL TQIEQELQRA RQQGIFISTS  240
SDQSHSVSGN GALAFDMEYA RWLEEHNKHI NELRAAVNAH VGDNDLRSTV DNIMAHYDEI  300
FKLKGVAAKA DVFHVLSGMW KTPAERCFMW LGGFRSSELL KLLAGQLEPL TEQQLAGIAN  360
LQQSSQQAED ALSQGMEALQ QSLAETLASG SLGPAGSSGN VANYMGQMAM AMGKLGTLEN  420
FLRQADNLRL QTLQQMQRIL TTRQSARALL AISDYFSRLR ALSSLWLAQL IRCWIADRLC  480
NRGLPHPDRC VLCDQHEESI DHILIACPKS HQLWWVALRT IGQPGCLPMN ESSFFLWFCN  540
IREKIQKSHR RGFDTIVALE RNNRVFNQQQ RKWPEVAKAM AAEAELWRLG NAAIPALRV

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional regulator involved in defense response. {ECO:0000250\|UniProtKB:Q7X993}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00349	DAP	Transfer from AT3G12250	Download

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AY620415	0.0	AY620415.1 Oryza sativa (japonica cultivar-group) clone P0702B09 bZIP transcription factor mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015651146.1	0.0	transcription factor TGAL1
Swissprot	Q6IVC2	0.0	TGAL1_ORYSJ; Transcription factor TGAL1
TrEMBL	A0A0E0JQ08	0.0	A0A0E0JQ08_ORYPU; Uncharacterized protein
STRING	OPUNC01G33450.1	0.0	(Oryza punctata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP486	38	185

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06950.4	1e-155	bZIP family protein

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Chern M, et al. Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins. BMC Genomics, 2014. 15: p. 461 [PMID:24919709]