PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC01G34270.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 281aa    MW: 30878.7 Da    PI: 5.3061
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC01G34270.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY53.25.7e-1771127359
                      -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-S.SSTTEEEEEEES--SS- CS
             WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversa.edpkvveitYegeHnhe 59 
                      Dg+ WrKYGqK++k+s fpr  Yr   ++Cp+ k v++++ +dp +  +tY+ eH+++
  OPUNC01G34270.1  71 DGHLWRKYGQKNIKDSAFPRCSYR-EDRQCPASKLVQQENdDDPPLYMVTYTYEHTCN 127
                      9*******************9999.5679*******987516799***********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.808.6E-1858127IPR003657WRKY domain
SuperFamilySSF1182901.44E-1662128IPR003657WRKY domain
SMARTSM007745.3E-2869128IPR003657WRKY domain
PfamPF031067.4E-2071126IPR003657WRKY domain
PROSITE profilePS5081112.49571129IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    Send to blast
MASTPRLKRE QSFDFEEASA QEAVGSASAS YSPPGGGVFG ISPPESSPRD GRKRRKDRPS  60
WVKHTFTPHF DGHLWRKYGQ KNIKDSAFPR CSYREDRQCP ASKLVQQEND DDPPLYMVTY  120
TYEHTCNTTL VPTPDVVAEQ PSPAAGDAYL LRFGSAAAAG GGGIHADAQQ QTERERQQQY  180
QQHSARRPFM MLSFDSGSHL HEQPHAFPPD GQLPAAAASP SSFTAAEALL PPAPPLTTTM  240
NDGGDLFSTW DALRYGLDDD HGHLGNHVYL PDDCNGDDDN Y
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15156RKRRKD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0033021e-176AP003302.2 Oryza sativa Japonica Group genomic DNA, chromosome 1, PAC clone:P0703B11.
GenBankAP0033481e-176AP003348.3 Oryza sativa Japonica Group genomic DNA, chromosome 1, PAC clone:P0485B12.
GenBankAP0149571e-176AP014957.1 Oryza sativa Japonica Group DNA, chromosome 1, cultivar: Nipponbare, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015644112.11e-131probable WRKY transcription factor 2
TrEMBLA0A0E0JQD20.0A0A0E0JQD2_ORYPU; Uncharacterized protein
STRINGOPUNC01G34270.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP115292433
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22570.15e-14WRKY DNA-binding protein 38