PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC01G44450.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 367aa    MW: 40523.1 Da    PI: 5.0984
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC01G44450.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.12.7e-31146202258
                      --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 
                      dDgy+WrKYGqK++k+s++prsYYrCt ++C++kk+ver+ ++p+++++tYeg H h
  OPUNC01G44450.1 146 DDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCNAKKQVERALDEPDTLIVTYEGLHLH 202
                      8******************************************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081127.026140205IPR003657WRKY domain
Gene3DG3DSA:2.20.25.807.1E-29143203IPR003657WRKY domain
SuperFamilySSF1182902.88E-26144203IPR003657WRKY domain
SMARTSM007744.9E-36145204IPR003657WRKY domain
PfamPF031063.9E-25146202IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    Send to blast
MQESRKYWRD GDVVGEELLR EILDETAAAV HSNSNSNSNS NSNSKEEEEE EREYFAAAMA  60
PCGRRRRQSM VNKLISTVYS GPTISDIESA LSFTAGGDQQ LIADGHNFTA SCTPAVFSPE  120
KTLSKTMENK YTLKMKSCGN NGGLADDGYK WRKYGQKSIK NSPNPRSYYR CTNPRCNAKK  180
QVERALDEPD TLIVTYEGLH LHYTYSHFLH STASSSSTTT QQQLQPQPPQ LSKKPKLHLH  240
DDPPPPPEME DTTMMIMQSF SSQQQHQLLP ADMMMASDDC YINGSSLMMS LDDEQAAAGG  300
LLEDVVPLLV RRPTSCNNYY SPATTCTSDN DGSSASPSPS ISSSVSVSSW TTPMSPCIDM  360
AILSNIF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-191442021371WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1106250.0AK110625.1 Oryza sativa Japonica Group cDNA clone:002-169-B02, full insert sequence.
GenBankAY3418420.0AY341842.1 Oryza sativa (japonica cultivar-group) WRKY1 mRNA, complete cds.
GenBankAY8706050.0AY870605.1 Oryza sativa (japonica cultivar-group) WRKY17 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015641374.11e-143probable WRKY transcription factor 49
TrEMBLA0A0E0JU860.0A0A0E0JU86_ORYPU; Uncharacterized protein
STRINGOPUNC01G44450.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP75253551
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43290.17e-44WRKY DNA-binding protein 49