PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC02G02000.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 162aa    MW: 16857.9 Da    PI: 7.5194
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC02G02000.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_138.23.1e-123376447
                     XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47
                      +r++r+ +NRe+ArrsR RK+  ++ L+  v+ L  eN   + 
  OPUNC02G02000.1 33 QRRAKRMLSNRESARRSRMRKQRHLDDLTAQVAHLRRENAHVAT 76
                     689************************************87664 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003387.6E-163094IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.7833274IPR004827Basic-leucine zipper domain
PfamPF001701.6E-103375IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1706.7E-1034106No hitNo description
SuperFamilySSF579592.97E-113484No hitNo description
CDDcd147022.30E-153583No hitNo description
PROSITE patternPS0003603752IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009744Biological Processresponse to sucrose
GO:0080149Biological Processsucrose induced translational repression
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    Send to blast
MASSSGSGGS AVSAAAGGSS SAAEEELRAL MEQRRAKRML SNRESARRSR MRKQRHLDDL  60
TAQVAHLRRE NAHVATALGL TTQGLLAVDA ENAVLRTQAA ELAARLASLN DILSCINTNG  120
AAAAAALSVA AATATATDPL LAFDSAAFDD LFRSSPEMFQ LC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14653RRSRMRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00470DAPTransfer from AT4G34590Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0708870.0AK070887.1 Oryza sativa Japonica Group cDNA clone:J023064O22, full insert sequence.
GenBankAP0049970.0AP004997.2 Oryza sativa Japonica Group genomic DNA, chromosome 2, PAC clone:P0030G11.
GenBankAP0149580.0AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015689573.12e-84PREDICTED: ocs element-binding factor 1-like
TrEMBLA0A0E0JV621e-108A0A0E0JV62_ORYPU; Uncharacterized protein
STRINGOPUNC02G02000.11e-108(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44593367
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34590.13e-28G-box binding factor 6