PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC02G06400.2
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 473aa    MW: 50295.3 Da    PI: 8.685
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC02G06400.2genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.83.5e-11181219341
                      XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeae 41 
                      + k  rr+++NReAAr+sR+RKka+i++Le+    L++ 
  OPUNC02G06400.2 181 DAKTLRRLAQNREAARKSRLRKKAYIQNLETSRIRLSQL 219
                      67999*************************865555554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.2E-8178223No hitNo description
SMARTSM003381.9E-8179242IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.036181226IPR004827Basic-leucine zipper domain
PfamPF001701.7E-8182221IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.94E-7183226No hitNo description
PROSITE patternPS000360186201IPR004827Basic-leucine zipper domain
PfamPF141441.1E-8268322IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 473 aa     Download sequence    Send to blast
MGDRPWQQQL QPHDQQASCS VTAGMMMQAS ATSSNIHGNN IIRKDPGGGY DMAELDHIFL  60
YLNSQDQASA AIQDQPQTLN IFPSQPMHAG EPSPKGSSSM AAINSAPSNN ALAIAAGSSK  120
RPAAAGGQPS RLNNPADQPS ASGKDGKAAV VKKEGGGGGG GKQHGGAAAA ASEHEGPKTP  180
DAKTLRRLAQ NREAARKSRL RKKAYIQNLE TSRIRLSQLE QELVQRSRTQ GAILGGGAFP  240
ASIGGQSPEA AWFDGEYARW VESHERMMAH LRAAVEEEQQ HQHGGVAEAQ LRQLVDAAAA  300
HHGVLVELKA AVASADVFHL MVVRHAEPLT EQQAAGVYGV QQSAREREEA LDRDLHTTHR  360
ALSDAVSSDA LLLFPPGAGA GGAAYSDVAM AHLSLAIANL TSLEAFVRQA DALRLQTLYK  420
LPQILTARQS ARCFLAIADH SHRLRALTSL WLSRPRHSDQ LQPPPAAAAR LHP
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126101e-118CP012610.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 2 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015626935.10.0transcription factor TGAL9-like isoform X1
SwissprotQ0E3420.0TGAL9_ORYSJ; Transcription factor TGAL9
TrEMBLA0A0E0JWS70.0A0A0E0JWS7_ORYPU; Uncharacterized protein
STRINGOPUNC02G06400.10.0(Oryza punctata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.38e-85bZIP family protein
Publications ? help Back to Top
  1. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]