PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC02G07680.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 195aa    MW: 21414.1 Da    PI: 5.5058
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC02G07680.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM51.92.6e-1648452128
              NAM  52 kaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk...kgelvglkktLvfykgrapkge....ktdWvmheyrl 128
                      ++++++ yfF+ + +++   + ++r+t sg+Wk tg++k++++    ++  + +k+ +vf+ g+++++     kt W+mheyrl
  OPUNC02G07680.1   4 YGSDHDRYFFTMATREA---QASRRTTPSGFWKPTGTKKTIFVVagaHEVPTAVKRRFVFHLGHHQQPLgdnnKTPWIMHEYRL 84 
                      4567889*****99976...478899***************99866666679*********665444322234*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100522.9991118IPR003441NAC domain
SuperFamilySSF1019412.35E-194118IPR003441NAC domain
PfamPF023652.1E-10984IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    Send to blast
MAMYGSDHDR YFFTMATREA QASRRTTPSG FWKPTGTKKT IFVVAGAHEV PTAVKRRFVF  60
HLGHHQQPLG DNNKTPWIMH EYRLINPPRA AAAVAPPSSP VNTIAAMEEI VLCRISNKDL  120
PKPPCLSLHN GLLQFSSVGL SGDDAYNYLI LDLEPLAMEY PNVDIGNVDD DAAAATDDPG  180
DLDEEVDSMP RNHGG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126101e-143CP012610.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 2 sequence.
GenBankDQ4488171e-143DQ448817.1 Oryza sativa (indica cultivar-group) genomic sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015625739.13e-97NAC domain-containing protein 48-like
TrEMBLA0A0E0JXA81e-144A0A0E0JXA8_ORYPU; Uncharacterized protein
STRINGOPUNC02G07680.11e-145(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP165401213
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.11e-11NAC domain containing protein 25