PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC02G10120.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 395aa    MW: 42159.1 Da    PI: 5.5045
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC02G10120.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY28.23.7e-09178197221
                      --SS-EEEEEEE--TT-SS- CS
             WRKY   2 dDgynWrKYGqKevkgsefp 21 
                       D ++WrKYGqK++kgs++p
  OPUNC02G10120.1 178 ADVWAWRKYGQKPIKGSPYP 197
                      69****************99 PP
2WRKY51.52e-162272662159
                      -EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY  21 prsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                       r+YYrC+s+ gCp++k+vers++dp++++ tY+g+Hnh+
  OPUNC02G10120.1 227 NRGYYRCSSSkGCPARKQVERSRSDPNTFILTYTGDHNHS 266
                      59******998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.7E-29163268IPR003657WRKY domain
PROSITE profilePS5081125.568172268IPR003657WRKY domain
SuperFamilySSF1182904.05E-6175197IPR003657WRKY domain
SMARTSM007743.5E-29177267IPR003657WRKY domain
PfamPF031061.4E-4179197IPR003657WRKY domain
SuperFamilySSF1182901.44E-13226268IPR003657WRKY domain
PfamPF031061.6E-13227265IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0007263Biological Processnitric oxide mediated signal transduction
GO:0009739Biological Processresponse to gibberellin
GO:0042742Biological Processdefense response to bacterium
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 395 aa     Download sequence    Send to blast
MEEELCGNNW DLDAVVRLGC CRRRISPASA VAAQQVDPFA PFLLPVTQPT TVATEVAEKE  60
VGVEAGWSFP ELAVRDGGGL GRDADELLKA FCAAFPSSSS SSSLPAPAPP PPQPQPEQPQ  120
QKPVAVVQEN LPVPTTAAPA KAQPAAVRQV PGGVPRSKRR KNQQKKVVRH VPADGVSADV  180
WAWRKYGQKP IKGSPYPSPV SISPAGHRRR RRREMEEKLT GALLCWNRGY YRCSSSKGCP  240
ARKQVERSRS DPNTFILTYT GDHNHSAPTH RNSLAGTTRN KLPSSTSASA QPQPPPPSVV  300
VAGGAEAASH QGTTSPAGLS PTTPLRTPSM EEEEEDDDEL LVEDMEMAGE DELLFLNGGG  360
DDATAALDGT PMSSLFDIDE PFLPSPWTEP TAAGS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1207212RRRRRR
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00561DAPTransfer from AT5G52830Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0046831e-129AP004683.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, PAC clone:P0006C08.
GenBankAP0149581e-129AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015623400.11e-147probable WRKY transcription factor 27
TrEMBLA0A0E0JY710.0A0A0E0JY71_ORYPU; Uncharacterized protein
STRINGOPUNC02G10120.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP53583361
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.13e-37WRKY family protein