PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC02G19370.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family EIL
Protein Properties Length: 494aa    MW: 54365.3 Da    PI: 4.8492
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC02G19370.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3369.46.2e-113783852319
                      XXXXXXXXXXXXXXXXXXXXXX..XXXXX...........XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
             EIN3   2 elkkrmwkdqmllkrlkerkkqlledkeaa..........tgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpve 85 
                      +lkkrmwkdqmll++l++ +     +               g++++++++ + rrk+m raQDg+L++Mlk+me+cna+GfvYgi++e g pv+
  OPUNC02G19370.1  78 DLKKRMWKDQMLLMKLEGGRPGGGSRGG-GlaaagtssegYGSQEEETPEARCRRKAMLRAQDGVLRHMLKMMEACNARGFVYGIVDEAGVPVS 170
                      9*****************9998653333.234455566666777777*********************************************** PP

                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--H CS
             EIN3  86 gasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkel 179
                      g+sdsLr+WWk++v+fdr+gp+a++          g+s  q+   s  h+l+++qD+tlgS+Lsal+qhc+ppqr+fple+g++pPWWPtG+e+
  OPUNC02G19370.1 171 GSSDSLRGWWKDNVSFDRAGPMALIGP--------GDSP-QAGLASCLHRLQDIQDSTLGSVLSALIQHCEPPQRSFPLERGLAPPWWPTGEEA 255
                      ***********************9988........2222.24457789********************************************** PP

                      HHHHHT.--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXXXXXXXXX CS
             EIN3 180 wwgelg.lskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahssslrkqsp 272
                      wwg++g ++++qg ppy+kphdlkkawk+s+L+avikhmsp+++++r+l++qsk+lq+kmsakes+++++v++qee++ ++++++ +      +
  OPUNC02G19370.1 256 WWGSQGeMQAHQGVPPYRKPHDLKKAWKISLLSAVIKHMSPRFDQMRKLVWQSKRLQQKMSAKESDTWSKVIRQEEALNRRLKTSLQ-----IT 344
                      *****************************************************************************9998888764.....22 PP

                      XXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXX CS
             EIN3 273 kvtlsceqkedvegkkeskikhvqavkttagfpvvrkrkkkpsesak 319
                       +   +    d +g++e+k  +    +     ++++krk+++++s +
  OPUNC02G19370.1 345 PLDGGD----DDDGEEETK--DRDGLEDVVRGAAQDKRKREYTRSGS 385
                      222222....223333333..11222222334455555555555554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048737.0E-11678331No hitNo description
Gene3DG3DSA:1.10.3180.106.5E-65205340IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167684.32E-57209334IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 494 aa     Download sequence    Send to blast
MASRSRTNKQ SSEHHLRTRG KRHHFSDEWS MEHAEEHEHE HGRGGEHDDA PEPEPEPEQE  60
QEELSDSESG AESIEISDLK KRMWKDQMLL MKLEGGRPGG GSRGGGLAAA GTSSEGYGSQ  120
EEETPEARCR RKAMLRAQDG VLRHMLKMME ACNARGFVYG IVDEAGVPVS GSSDSLRGWW  180
KDNVSFDRAG PMALIGPGDS PQAGLASCLH RLQDIQDSTL GSVLSALIQH CEPPQRSFPL  240
ERGLAPPWWP TGEEAWWGSQ GEMQAHQGVP PYRKPHDLKK AWKISLLSAV IKHMSPRFDQ  300
MRKLVWQSKR LQQKMSAKES DTWSKVIRQE EALNRRLKTS LQITPLDGGD DDDGEEETKD  360
RDGLEDVVRG AAQDKRKREY TRSGSGSSSS SGNSGGKFPR GSGGADQLAV MIPELASAEE  420
GRSPINELMK LYYSCLQEEG VADGGGAGGE EECDVAALVP SEVLVGVDEV AQDVLFDLIG  480
SYPEVDDVLH FMNE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A2e-502073371130Protein ETHYLENE INSENSITIVE 3
4zds_B2e-502073371130Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
194100GGRPGGG
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0051160.0AP005116.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, PAC clone:P0703B01.
GenBankAP0149580.0AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015625091.10.0putative ETHYLENE INSENSITIVE 3-like 4 protein
SwissprotQ9LX163e-92EIL4_ARATH; Putative ETHYLENE INSENSITIVE 3-like 4 protein
TrEMBLA0A0E0K1G60.0A0A0E0K1G6_ORYPU; Uncharacterized protein
STRINGOPUNC02G19370.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63838168
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10120.14e-90EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Jeong HJ,Choi JY,Shin HY,Bae JM,Shin JS
    Seed-specific expression of seven Arabidopsis promoters.
    Gene, 2014. 553(1): p. 17-23
    [PMID:25261846]