PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC02G29130.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bHLH
Protein Properties Length: 222aa    MW: 24560.9 Da    PI: 11.377
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC02G29130.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.17.4e-0981127454
                      HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
              HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      + +++ r RR+riN++++eL  l+P a    s+ +s ae+L+ +++ I+ L
  OPUNC02G29130.1  81 TQSAAARERRRRINNKMAELSGLIPGA----SRMNSTAEMLQATTHLIRLL 127
                      56778899******************9....788************99976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.64977127IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.37E-878127IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.3E-780127IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.0E-681127IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    Send to blast
MRRCVVDDEF HRAGAFLPAP SPELVTRFVP TPPPLPSVQQ PRWELPDAVF VRGAGATEAK  60
KVGTEGGAND GRHHHHHNQV TQSAAARERR RRINNKMAEL SGLIPGASRM NSTAEMLQAT  120
THLIRLLPNP PFPIAEDATA AAMVVASLFD DLEPTTTCIR IRRARRHGRE HGKGSFAFVE  180
LNDDSYVSNL QPSSIRSRRF ELLRTTSGTL QSPLSPRVVR RA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0E0K4X01e-161A0A0E0K4X0_ORYPU; Uncharacterized protein
STRINGOPUNC02G29130.11e-161(Oryza punctata)