PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC02G33130.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 106aa    MW: 11650 Da    PI: 6.791
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC02G33130.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP231.15.9e-10737236
              AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkf 36
                     +y+GVr+++ +g+Wv+eIr+p        +r++lg+ 
  OPUNC02G33130.1  7 RYRGVRQRH-WGSWVSEIRHP-----LlkTRIWLGTE 37
                     69******9.**********8.....334****9984 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.70E-14636No hitNo description
PfamPF008473.0E-4742IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.8E-14746IPR001471AP2/ERF domain
SuperFamilySSF541719.81E-8750IPR016177DNA-binding domain
SMARTSM003809.1E-8762IPR001471AP2/ERF domain
PROSITE profilePS5103212.246751IPR001471AP2/ERF domain
PRINTSPR003679.3E-6819IPR001471AP2/ERF domain
PRINTSPR003679.3E-63046IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 106 aa     Download sequence    Send to blast
MARPQQRYRG VRQRHWGSWV SEIRHPLLKT RIWLGTEAGA TAAVATPASA ASAATPLGNA  60
AAAAADARTT TTTYGAEWSG RFLEEQHIEQ MIDELLDSNF SMEICY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0039753e-62AP003975.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, BAC clone:OJ1004_E04.
GenBankAP0149583e-62AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence.
GenBankCP0126103e-62CP012610.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 2 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025797628.11e-37ethylene-responsive transcription factor ERF003
TrEMBLA0A0E0K6B66e-72A0A0E0K6B6_ORYPU; Uncharacterized protein
STRINGOPUNC02G33130.11e-72(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP141835118
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25190.19e-20ERF family protein