PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC03G06340.2
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family CAMTA
Protein Properties Length: 1007aa    MW: 112592 Da    PI: 5.1318
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC03G06340.2genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1119.61.5e-37201223118
             CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfq 95 
                      ke ++rwl+++ei++iL+n+++++++ e+++rp+sgsl+L++rk              k+dgktv+E+he+LK g+++vl+cyYah+een +fq
  OPUNC03G06340.2  20 KEaQRRWLRPTEICKILKNYRSFRIAPEPPNRPPSGSLFLFDRK--------------KRDGKTVKEAHERLKSGSIDVLHCYYAHGEENINFQ 99 
                      55599*************************************85..............689********************************* PP

             CG-1  96 rrcywlLeeelekivlvhylevk 118
                      rr+yw+Lee++ +ivlvhylevk
  OPUNC03G06340.2 100 RRSYWMLEEDYMHIVLVHYLEVK 122
                      ********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143752.39115127IPR005559CG-1 DNA-binding domain
SMARTSM010762.2E-5418122IPR005559CG-1 DNA-binding domain
PfamPF038599.4E-3221121IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.105.0E-7419505IPR013783Immunoglobulin-like fold
CDDcd001026.27E-5420507No hitNo description
SuperFamilySSF812963.67E-17421506IPR014756Immunoglobulin E-set
PfamPF018331.9E-8421498IPR002909IPT domain
SuperFamilySSF484038.86E-17609713IPR020683Ankyrin repeat-containing domain
Gene3DG3DSA:1.25.40.205.3E-18611717IPR020683Ankyrin repeat-containing domain
CDDcd002044.71E-13612710No hitNo description
PROSITE profilePS5029718.086618722IPR020683Ankyrin repeat-containing domain
PROSITE profilePS500888.79618650IPR002110Ankyrin repeat
PROSITE profilePS500888.843651683IPR002110Ankyrin repeat
SMARTSM002480.013651680IPR002110Ankyrin repeat
SMARTSM002482000690719IPR002110Ankyrin repeat
SuperFamilySSF525403.19E-8822875IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000150.075824846IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.407825854IPR000048IQ motif, EF-hand binding site
PfamPF006120.0033826845IPR000048IQ motif, EF-hand binding site
SMARTSM000150.0022847869IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.578848872IPR000048IQ motif, EF-hand binding site
PfamPF006122.0E-4850869IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 1007 aa     Download sequence    Send to blast
MAEGRRYAIA PQLDIEQILK EAQRRWLRPT EICKILKNYR SFRIAPEPPN RPPSGSLFLF  60
DRKKRDGKTV KEAHERLKSG SIDVLHCYYA HGEENINFQR RSYWMLEEDY MHIVLVHYLE  120
VKAGKLSSRS TGHDDILQAS RVDSPLSQLP SQTTEGESSV SGQASEYDET ESAYLKQNSV  180
QQIFIREEPD TTLSLGCGSM KMEVDLYQGL QATAPNTGFY SHGQDNLPVV LNESDLGTAF  240
NGPNSQCDLS LWIEAMKPDK GTHQIPLYQA PVPSDQTPFI GGPGIESFTF DEVYNNGLSI  300
KDVDGDDTDG ETPWQIPNAS DTFATVDSFQ QNDKTLEEAI NYPPLKTQSS SLSDIIKDSF  360
KKNDSFTRWM SKELAEVDDS QITSSSGVYW NSEEADNIIE ASSSDQYTLG PVLAQDQLFS  420
IVDFSPTWTY AGSKTRVFIK GNFLNSDEVK RLKWSCMFGE DEVPAEIIAD DTLVCYSPSH  480
KPGRVPFYVT CSNRLACSEV REFEFRPQYM DAPSPHGSTN KTYLQKRLDK LLSLEQDEIQ  540
ATLSNPTKEI IDLSKKISSL MMNNDDWSEL LKLADDNDPA TDDKQDQFLQ NCIKEKLLIW  600
LLHKVGDGGK GPSVLDEEGQ GVLHLAAALG YDWAIRPTIT AGVNINFRDA HGWTALHWAA  660
FCGRERTVVA LIALGAAPGA VTDPTPSFPS GSTPADLAST NGHKGISGFL AESSLTSHLQ  720
TLNLKEAMRS SAGEISGLPG IVNVADRSTL PLAVEGRQTG SMGDSLGAVR NAAQAAARIY  780
EVFRMQSFQR KQAVQYEDDN GVISDERAMS LLSAKPSKPA QLDPLHAAAT RIQNKFRGWK  840
GRKEFLLIRQ RIVKIQAHVR GHQVRKHYRK IIWSVGIVEK VILRWRRRGA GLRGFRPTEN  900
AVSESTSSSS GNVTQNMPAE NDYDFLQEGR KQTEERLQKA LARVKSMVQY PDARDQYQRI  960
LTVVTKMQES QAMQEKMLEE STDMDEGLLM SEFKELWDDD VPTPGYF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0666510.0AK066651.1 Oryza sativa Japonica Group cDNA clone:J013074G10, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015631248.10.0calmodulin-binding transcription activator 1 isoform X1
TrEMBLA0A0E0K9W60.0A0A0E0K9W6_ORYPU; Uncharacterized protein
STRINGOGLUM03G06680.10.0(Oryza glumipatula)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64220.20.0Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains