PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OPUNC03G09880.1

Organism

Oryza punctata

Taxonomic ID

4537

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bHLH

Protein Properties

Length: 145aa MW: 15782.9 Da PI: 12.6791

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OPUNC03G09880.1	genome	OGE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.7	0.00047	80	122	8	54
HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + r R +ri ++ +eL +l+P ++ +s e+L+ A + I+ L OPUNC03G09880.1 80 ASRERWRRISNKTAELSRLIPGT----ARMNSTTEMLQAAARPIRLL 122 5577888899999*********6....46699999999999888765 PP

Sequence ? help Back to Top
Protein Sequence Length: 145 aa Download sequence Send to blast
MRRRRRVPRG RSFPAGAAAG VGDLFRPHAA AAATGTRWEL PNAVFMQGAG AAEAKKGGAA 60 GSGDDGRHRH HHNYVVQSAA SRERWRRISN KTAELSRLIP GTARMNSTTE MLQAAARPIR 120 LLANPSFPHS RRRRGGHHGR GLSLR

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A0E0KB66	3e-97	A0A0E0KB66_ORYPU; Uncharacterized protein
STRING	OPUNC03G09880.1	5e-98	(Oryza punctata)