PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OPUNC03G14090.1

Organism

Oryza punctata

Taxonomic ID

4537

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 169aa MW: 18422.1 Da PI: 9.2223

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OPUNC03G14090.1	genome	OGE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	37	7.3e-12	26	84	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 + rk +NR++Ar+sR +K+++++ L+ ++++L eN+a++ + + + +++e+ OPUNC03G14090.1 26 RQRNRKKSNRLSARKSRMKKQQYVDGLAVEAEKLRRENDAMRAGVGAVLQRCRMVEQEN 84 3345788***********************************99888888887777776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	9.6E-11	19	78	No hit	No description
SMART	SM00338	2.8E-12	21	86	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.979	24	87	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.3E-8	26	80	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	2.44E-8	26	79	No hit	No description
CDD	cd14702	1.09E-14	27	78	No hit	No description
PROSITE pattern	PS00036	0	30	44	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 169 aa Download sequence Send to blast
MSVAPAPEGS ARRAAEATAT ATEEERQRNR KKSNRLSARK SRMKKQQYVD GLAVEAEKLR 60 RENDAMRAGV GAVLQRCRMV EQENRVLTAH ARELCSALQL RGSQLRLLGE VAGVPLDVPD 120 VADHLVQLYG GGGGGLGMPP LSPPRIPVLF FQPDSVMDAV SMIQDYESI

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AC226819	0.0	AC226819.1 Oryza minuta clone OM__Ba0167K10, complete sequence.
GenBank	AC226821	0.0	AC226821.1 Oryza minuta clone OM__Ba0192M11, complete sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015631799.1	2e-76	ocs element-binding factor 1
TrEMBL	A0A0E0KCR8	1e-118	A0A0E0KCR8_ORYPU; Uncharacterized protein
STRING	OPUNC03G14090.1	1e-119	(Oryza punctata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP12504	28	37

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75390.1	1e-12	basic leucine-zipper 44