PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OPUNC03G22610.1

Organism

Oryza punctata

Taxonomic ID

4537

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

Dof

Protein Properties

Length: 372aa MW: 36586.7 Da PI: 8.5769

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OPUNC03G22610.1	genome	OGE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.4	3.7e-39	40	100	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+ l+cprCds ntkfCyynnyslsqPr+fCk+CrryWtkGGalrnvPvGgg+rknk+s+ OPUNC03G22610.1 40 QEQGLRCPRCDSPNTKFCYYNNYSLSQPRHFCKTCRRYWTKGGALRNVPVGGGCRKNKRSR 100 57889*****************************************************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	7.9E-33	42	98	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.609	44	98	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	8.0E-24	44	93	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	46	82	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0010052	Biological Process	guard cell differentiation
GO:0010118	Biological Process	stomatal movement
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:1902066	Biological Process	regulation of cell wall pectin metabolic process
GO:0005634	Cellular Component	nucleus
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence Send to blast
MAPAAGDDAV VPRKGGGGGG GGTTTPPPPA QQQPPLPPPQ EQGLRCPRCD SPNTKFCYYN 60 NYSLSQPRHF CKTCRRYWTK GGALRNVPVG GGCRKNKRSR SAAASRLSLN LPTVDGIGGA 120 AAGGDPAAAA AAAARLGFLG GGTTMMMSSS TSPLGGAAAA AVADFQQGGA VGMLPLPRLQ 180 SPAGGVGHHQ YVPFGEWPSG DIAGGNAGSM NGGGHGAVSS TIASSIESLS FINQDLHWKL 240 QQQRLATMFL GPPGSASAAG AAQANDGGGS NGAQAPASGH AAGGGAFLHM AGSVPSMEAM 300 PSATSWFMDS CSYGLPSPPP PAAAAVAATP TSSNLNSGGR SSGGGGGDEN ATSNCGSAIP 360 AWGDISTFAM LP

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence Send to blast

MAPAAGDDAV VPRKGGGGGG GGTTTPPPPA QQQPPLPPPQ EQGLRCPRCD SPNTKFCYYN  60
NYSLSQPRHF CKTCRRYWTK GGALRNVPVG GGCRKNKRSR SAAASRLSLN LPTVDGIGGA  120
AAGGDPAAAA AAAARLGFLG GGTTMMMSSS TSPLGGAAAA AVADFQQGGA VGMLPLPRLQ  180
SPAGGVGHHQ YVPFGEWPSG DIAGGNAGSM NGGGHGAVSS TIASSIESLS FINQDLHWKL  240
QQQRLATMFL GPPGSASAAG AAQANDGGGS NGAQAPASGH AAGGGAFLHM AGSVPSMEAM  300
PSATSWFMDS CSYGLPSPPP PAAAAVAATP TSSNLNSGGR SSGGGGGDEN ATSNCGSAIP  360
AWGDISTFAM LP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	337	345	GGRSSGGGG

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	CP012611	0.0	CP012611.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 3 sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015630014.1	1e-141	dof zinc finger protein DOF5.7
TrEMBL	A0A0E0KFW9	0.0	A0A0E0KFW9_ORYPU; Uncharacterized protein
STRING	OPUNC03G22610.1	0.0	(Oryza punctata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP140	37	367

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51700.1	7e-30	DOF zinc finger protein 1