PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC03G25490.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family G2-like
Protein Properties Length: 2092aa    MW: 229165 Da    PI: 7.3879
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC03G25490.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like63.93.1e-20358412455
          G2-like   4 lrWtpeLHerFveaveqLGGsekAtPkti...lelmkvkgLtlehvkSHLQkYRl 55 
                      lrW+ +LH+ Fveav+  GG+ +A P ++   +++m+v gLt +++kSHLQkYR 
  OPUNC03G25490.1 358 LRWSDDLHKIFVEAVAYHGGPYEAKPTAVketMQAMGVTGLTTHNIKSHLQKYRE 412
                      89************************777222667889****************5 PP
2G2-like63.93.1e-2019361990455
          G2-like    4 lrWtpeLHerFveaveqLGGsekAtPkti...lelmkvkgLtlehvkSHLQkYRl 55  
                       lrW+ +LH+ Fveav+  GG+ +A P ++   +++m+v gLt +++kSHLQkYR 
  OPUNC03G25490.1 1936 LRWSDDLHKIFVEAVAYHGGPYEAKPTAVketMQAMGVTGLTTHNIKSHLQKYRE 1990
                       89************************777222667889****************5 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF517352.6E-4674274IPR016040NAD(P)-binding domain
PRINTSPR000811.5E-157491IPR002347Short-chain dehydrogenase/reductase SDR
Gene3DG3DSA:3.40.50.7209.5E-5175284IPR016040NAD(P)-binding domain
PfamPF001061.4E-4175270IPR002347Short-chain dehydrogenase/reductase SDR
CDDcd052334.07E-4875289No hitNo description
PRINTSPR000811.5E-15150161IPR002347Short-chain dehydrogenase/reductase SDR
PROSITE patternPS000610214242IPR020904Short-chain dehydrogenase/reductase, conserved site
PRINTSPR000811.5E-15227246IPR002347Short-chain dehydrogenase/reductase SDR
PRINTSPR000811.5E-15251268IPR002347Short-chain dehydrogenase/reductase SDR
SuperFamilySSF466891.79E-11352414IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.4E-18354413IPR009057Homeodomain-like
TIGRFAMsTIGR015574.2E-15358412IPR006447Myb domain, plants
PfamPF102251.3E-25720917IPR019358NEMP family
PfamPF135202.6E-4711311495IPR002293Amino acid/polyamine transporter I
PfamPF001062.6E-2916581834IPR002347Short-chain dehydrogenase/reductase SDR
SuperFamilySSF517351.42E-3216581854IPR016040NAD(P)-binding domain
Gene3DG3DSA:3.40.50.7206.2E-3616591838IPR016040NAD(P)-binding domain
CDDcd052331.94E-3216601845No hitNo description
PROSITE patternPS00061017781806IPR020904Short-chain dehydrogenase/reductase, conserved site
SuperFamilySSF466891.79E-1119301992IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.4E-1819321991IPR009057Homeodomain-like
TIGRFAMsTIGR015574.2E-1519361990IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003333Biological Processamino acid transmembrane transport
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0055114Biological Processoxidation-reduction process
GO:0005634Cellular Componentnucleus
GO:0016021Cellular Componentintegral component of membrane
GO:0003677Molecular FunctionDNA binding
GO:0015171Molecular Functionamino acid transmembrane transporter activity
GO:0016491Molecular Functionoxidoreductase activity
Sequence ? help Back to Top
Protein Sequence    Length: 2092 aa     Download sequence    Send to blast
MAATATYLPL HAQAKVGLAP LRPSCSAAGT RLPGRPARRR LAARGGPEVA GIRAEAAPGG  60
GGIARREAMV PPYNVLITGS TKGIGYALAK EFLKAGDNVV ICSRSAERVE SAVTDLKKEF  120
GEQHVWGIVC DVREGKDVKA LVDFSRDKMK HIDIWINNAG SNAYSYKPLV ETSDEALMEV  180
ITTNTLGLMI CCREAINMMR NQPRGGHIFN IDGAGSDGRP TPRFAAYGAT KRSVVHLTKS  240
LQAELQMNEV NNVMVHNLSP GMVTTDLLMS GATTKQVADY LVPNIRAIPT NQSMKPTYIR  300
FLTGLKAYSR IFSRIAFGAR RNKIMSNSQP AQDDDASYMS SILVSRLILA MQPTRSYLRW  360
SDDLHKIFVE AVAYHGGPYE AKPTAVKETM QAMGVTGLTT HNIKSHLQKY RESFSSGAGS  420
LHDHDLLGTT SPSKEALDLT SEMVRDNDAA MAEIEMLNDL LLDHDIEMME KELMSEIKFI  480
EHNFEISESA LDEYMDDLAN YAFDLTGPAN SSSRPLVRRI RIWRRRRRPR EMTPAAEASS  540
SSAETTGSSA GSAPSTAAAA ATPHSSYRRT APPLLLLASL AALLIISTGD DTAAFDSATV  600
GRSIKDVSLE NPVVTFLPSS LGGQFCERVR LSGIPKLHIG SYANQIRVKM NVSQSMPEKF  660
HWKIEICFHG NASMGLCQCE TGEWQNLQNG MWNAVKSPYG NKYVDVKVAD KTSTRFSISI  720
QEGVGSYAVH YFSTLVASIL ENFGLSEEMH NPVSIFLLVA IVLTGAGFGY WMVRRFILSK  780
DGSVDAGIAQ FVKWAMRVVA ICFVMQSTLD PLLALFALAA SWWICSVFTA YRAPKSTTLK  840
QKQSKASTQP MYNKGSPNPR QIQFLSPSKR DIGRTTSNSS ATQYGWSNLA NGGLVSPTLT  900
KRVVPDNRDE DHYSTFHNIQ PRKYSKEEWD DFTQKSTRKA LMECTATPEF ARWVADNAHR  960
LRVEQQDDAS EDELIESSSN SSEETVQEAD TGLFSGRRFQ REGERERRRN PRETKKARAE  1020
EAVELSQPRR LTSPRFLPLR PPAAAQSPRN WRSSISEFFS DRIPRLFPAG ILGSWAIVMA  1080
LEDGGKAGRR RRGWGGGFPS LMRRKQVDSD RVRAAEGQGQ PQLAKELNIP ALVAIGVGST  1140
IGAGVYVLVG TVAREHAGPA LTISFLIAGI ASALSAFCYA ELASRCPSAG SAYHYSYICV  1200
GEGVAWLIGW ALVLEYTIGG SAVARGISPN LALFFGGPDS LPWILSRHQL PWFDVIVDPC  1260
AAALSSAVQG LITVLNACVM IFVIVAGSYI GFQIGWVGYK VTDGYFPHGI NGMLAGSATV  1320
FFAYIGFDTV ASTAEEVKNP QRDLPLGIGA ALSICCCLYM MVSVVIVGLV PYFAMDPDTP  1380
ISSVFAKHGM QWAMYIVTSG AVLALCSTLL GSLLPQPRIL MAMARDGLLP SFFADVNKRT  1440
QVPVKSTVVT GLCAAALAFF MDVSQLAGMV SVGTLLAFTI VAVSILILRY VPPDEVPLPS  1500
SLQETFCLSQ EYDEERVSGT LGDERCKTSE TKDVILAESM EDPLIEKKIT RKMDEMKRRK  1560
VAAFSIGSVC VGVLPVLASS LGLTKMMAGI LSANLEDLHA LSFHCYQSCL SSGAAWMRVG  1620
IWLLVGVLVY ILYGRTHSSL KDVIYVPVAQ ADEIHRSSSG YDVHSLSSTA ERVESAVTDL  1680
KKEFGEQHVW GIVCDVREGK DVKALVDFSR DKMKHIDIWI NNAGSNAYSY KPLVETSDEA  1740
LMEVITTNTL GLMICCREAI NMMRNQPRGG HIFNIDGAGS DGRPTPRFAA YGATKRSVVH  1800
LTKSLQAELQ MNEVNNVMVH NLSPGMVTTD LLMSGATTKQ AKFFINILAE PPNVVADYLV  1860
PNIRAIPTNQ SMKPTYIRFL TGLKAYSRIF SRIAFGARRN KIMSNSQPAQ DDDASYMSSI  1920
LVSRLILAMQ PTRSYLRWSD DLHKIFVEAV AYHGGPYEAK PTAVKETMQA MGVTGLTTHN  1980
IKSHLQKYRE SFSSGAGSLH DHDLLGTTSP SKEALDLTSE MVRDNDAAMA EIEMLNDLLL  2040
DHDIEMMEKE LMSEIKFIEH NFEISESALD EYMDDLANYA FDLTGPANSS SR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5oqt_A1e-66110015072424Amino acid transporter
6f34_A9e-67110015072424Amino acid transporter
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0664360.0AK066436.1 Oryza sativa Japonica Group cDNA clone:J013063A11, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015629597.10.0uncharacterized protein LOC4333602
TrEMBLA0A0E0KGY70.0A0A0E0KGY7_ORYPU; Uncharacterized protein
STRINGOPUNC03G25490.20.0(Oryza punctata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12730.14e-13G2-like family protein