PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC03G25700.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 137aa    MW: 14766.2 Da    PI: 7.6223
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC03G25700.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY68.97.3e-2245102258
                      --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTE.EEEEEES--SS CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkv.veitYegeHnh 58 
                      +Dgy+W+KYGqK +k+ +  rsY+rC  ++C +kkkve   +dp + + i+Y g H+h
  OPUNC03G25700.1  45 EDGYEWKKYGQKFIKNIQKNRSYFRCRDQRCGAKKKVEWHPHDPGLnLRIVYDGAHHH 102
                      7******************************************986489********9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.4E-2438105IPR003657WRKY domain
PROSITE profilePS5081118.03939105IPR003657WRKY domain
SuperFamilySSF1182903.4E-2140105IPR003657WRKY domain
SMARTSM007741.1E-2144104IPR003657WRKY domain
PfamPF031064.0E-2045102IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    Send to blast
MNNRGAGGGR DQGDVDEEQT PPPAPPPETV STVVGGDSVQ LVMPEDGYEW KKYGQKFIKN  60
IQKNRSYFRC RDQRCGAKKK VEWHPHDPGL NLRIVYDGAH HHGSPSSAAG EGGGAAAAAN  120
QYDLSTQYFG GAGARLQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1338593e-87AC133859.4 Oryza sativa chromosome 3 BAC OSJNBa0075A22 genomic sequence, complete sequence.
GenBankAP0149593e-87AP014959.1 Oryza sativa Japonica Group DNA, chromosome 3, cultivar: Nipponbare, complete sequence.
GenBankCP0126113e-87CP012611.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 3 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015629814.11e-65probable WRKY transcription factor 2 isoform X1
TrEMBLA0A0E0KH101e-97A0A0E0KH10_ORYPU; Uncharacterized protein
STRINGOPUNC03G25700.12e-98(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP101583444
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69310.22e-12WRKY DNA-binding protein 57