PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC04G00760.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family C2H2
Protein Properties Length: 380aa    MW: 40213.4 Da    PI: 10.4861
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC04G00760.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.72.1e-05231253223
                      EETTTTEEESSHHHHHHHHHH.T CS
          zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                       C+ Cg++F+  ++L++H+   H
  OPUNC04G00760.1 231 ACSQCGEVFTKADSLEHHQAIrH 253
                      6******************9877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.619230258IPR007087Zinc finger, C2H2
PROSITE patternPS000280230253IPR007087Zinc finger, C2H2
SuperFamilySSF563991.12E-7255377No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 380 aa     Download sequence    Send to blast
MALSTLLLPS SSSSSSKTAT ATDTSDRRRH HHHNHTKRKK KPPPSLSPTP RTPPSGSGSH  60
RAMAASSKKS TKQVVVAAKT GHHPKKAAAA AAAPTMPSRG APSAAASVSS WEQLKSLLSC  120
RSATAAARVH DPAAPSALSR LRSHGAGACG ASLCAIRDVV DAASSAASTA AVSVDRDTTP  180
LTRSSRRAHR AATSGGGHHA SLRGLSGCYE CRAINVEPMS RRYPRPRELC ACSQCGEVFT  240
KADSLEHHQA IRHAVSELGP EDSGRNIVEI IFKSSWQKRD RPICQIDRIL KVHNAPRTVA  300
RFEAYRDAGC RAMLVCRVIA GRVRRNDDGG AATAAEDQGA FDSVAGDEAA SSVYGNLEEL  360
FVANPRAILP CFVVIYRVAE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12640RRRHHHHNHTKRKKK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU2268120.0EU226812.1 Oryza sativa Japonica Group isolate E04 putative nucleic acid binding protein (Os04g02510) gene, complete sequence.
GenBankEU2268130.0EU226813.1 Oryza sativa Japonica Group isolate E05 putative nucleic acid binding protein (Os04g02510) gene, complete sequence.
GenBankEU2268150.0EU226815.1 Oryza sativa Japonica Group isolate E07 putative nucleic acid binding protein (Os04g02510) gene, complete sequence.
GenBankEU2268170.0EU226817.1 Oryza sativa Japonica Group isolate E09 putative nucleic acid binding protein (Os04g02510) gene, complete sequence.
GenBankEU2268190.0EU226819.1 Oryza sativa Japonica Group isolate E11 putative nucleic acid binding protein (Os04g02510) gene, complete sequence.
GenBankEU2268220.0EU226822.1 Oryza sativa Japonica Group isolate F02 putative nucleic acid binding protein (Os04g02510) gene, complete sequence.
GenBankEU2268230.0EU226823.1 Oryza sativa Japonica Group isolate F03 putative nucleic acid binding protein (Os04g02510) gene, complete sequence.
GenBankEU2268240.0EU226824.1 Oryza sativa Japonica Group isolate F04 putative nucleic acid binding protein (Os04g02510) gene, complete sequence.
GenBankEU2268250.0EU226825.1 Oryza sativa Japonica Group isolate F05 putative nucleic acid binding protein (Os04g02510) gene, complete sequence.
GenBankEU2268260.0EU226826.1 Oryza sativa Japonica Group isolate F06 putative nucleic acid binding protein (Os04g02510) gene, complete sequence.
GenBankEU2268270.0EU226827.1 Oryza sativa Japonica Group isolate F07 putative nucleic acid binding protein (Os04g02510) gene, complete sequence.
GenBankEU2268280.0EU226828.1 Oryza sativa Japonica Group isolate F08 putative nucleic acid binding protein (Os04g02510) gene, complete sequence.
GenBankEU2268290.0EU226829.1 Oryza sativa Japonica Group isolate F09 putative nucleic acid binding protein (Os04g02510) gene, complete sequence.
GenBankEU2268310.0EU226831.1 Oryza sativa Japonica Group isolate F11 putative nucleic acid binding protein (Os04g02510) gene, complete sequence.
GenBankEU2268350.0EU226835.1 Oryza rufipogon isolate G03 putative nucleic acid binding protein (Os04g02510) gene, complete sequence.
GenBankEU2268390.0EU226839.1 Oryza rufipogon isolate G07 putative nucleic acid binding protein (Os04g02510) gene, complete sequence.
GenBankEU2268470.0EU226847.1 Oryza rufipogon isolate H03 putative nucleic acid binding protein (Os04g02510) gene, complete sequence.
GenBankEU2268480.0EU226848.1 Oryza rufipogon isolate H04 putative nucleic acid binding protein (Os04g02510) gene, complete sequence.
GenBankEU2268520.0EU226852.1 Oryza rufipogon isolate H08 putative nucleic acid binding protein (Os04g02510) gene, complete sequence.
GenBankEU2268560.0EU226856.1 Oryza rufipogon isolate H12 putative nucleic acid binding protein (Os04g02510) gene, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015634299.11e-138uncharacterized protein LOC4334944
TrEMBLA0A0E0KM760.0A0A0E0KM76_ORYPU; Uncharacterized protein
STRINGOPUNC04G00760.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP124312731
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.14e-46C2H2-like zinc finger protein