PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC05G01690.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 160aa    MW: 17475.4 Da    PI: 4.6347
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC05G01690.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY45.81.2e-1423671659
                     TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY 16 kgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
                     k+ e+  +YY+C+s  gCp++k+v+++++d ++++itY+++Hnh+
  OPUNC05G01690.1 23 KNREMILGYYKCSSYrGCPARKQVDKCRNDASLLIITYTSDHNHD 67
                     66777889****9877****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007749.8E-81968IPR003657WRKY domain
PfamPF031062.6E-112367IPR003657WRKY domain
SuperFamilySSF1182902.09E-112367IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.0E-152368IPR003657WRKY domain
PROSITE profilePS5081115.0893069IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    Send to blast
MACSRCIQKS GPYSMAKPHM DSKNREMILG YYKCSSYRGC PARKQVDKCR NDASLLIITY  60
TSDHNHDNYA ATATITTTTT TTNSVQQQAH NPDRSDAGDA LSNGMSLAEV VTVASSELSS  120
EEESCDIFDE LEELPVSASP LPSLSFMVQE SSFSDARTLL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1305981e-87AC130598.2 Oryza sativa Japonica Group cultivar Nipponbare chromosome 5 clone OSJNBa0056I11, complete sequence.
GenBankAK2417991e-87AK241799.1 Oryza sativa Japonica Group cDNA, clone: J065208G18, full insert sequence.
GenBankAK2880621e-87AK288062.1 Oryza sativa Japonica Group cDNA, clone: J075154N16, full insert sequence.
GenBankAP0149611e-87AP014961.1 Oryza sativa Japonica Group DNA, chromosome 5, cultivar: Nipponbare, complete sequence.
GenBankCP0126131e-87CP012613.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 5 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015639937.12e-73probable WRKY transcription factor 69
TrEMBLA0A0E0KY031e-115A0A0E0KY03_ORYPU; Uncharacterized protein
STRINGOPUNC05G01690.11e-116(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP149121821
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.18e-15WRKY DNA-binding protein 65