PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC05G01690.2
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 143aa    MW: 15564 Da    PI: 4.2773
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC05G01690.2genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY44.82.6e-1412502259
                     EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY 22 rsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
                     ++YY+C+s  gCp++k+v+++++d ++++itY+++Hnh+
  OPUNC05G01690.2 12 QGYYKCSSYrGCPARKQVDKCRNDASLLIITYTSDHNHD 50
                     58****9877****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007744.8E-7651IPR003657WRKY domain
SuperFamilySSF1182901.44E-111050IPR003657WRKY domain
PROSITE profilePS5081115.2041252IPR003657WRKY domain
PfamPF031062.8E-111250IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.6E-151251IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    Send to blast
MGRNQSKDLL IQGYYKCSSY RGCPARKQVD KCRNDASLLI ITYTSDHNHD NYAATATITT  60
TTTTTNSVQQ QAHNPDRSDA GDALSNGMSL AEVVTVASSE LSSEEESCDI FDELEELPVS  120
ASPLPSLSFM VQESSFSDAR TLL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1305989e-88AC130598.2 Oryza sativa Japonica Group cultivar Nipponbare chromosome 5 clone OSJNBa0056I11, complete sequence.
GenBankAK2417999e-88AK241799.1 Oryza sativa Japonica Group cDNA, clone: J065208G18, full insert sequence.
GenBankAK2880629e-88AK288062.1 Oryza sativa Japonica Group cDNA, clone: J075154N16, full insert sequence.
GenBankAP0149619e-88AP014961.1 Oryza sativa Japonica Group DNA, chromosome 5, cultivar: Nipponbare, complete sequence.
GenBankCP0126139e-88CP012613.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 5 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015639937.13e-74probable WRKY transcription factor 69
TrEMBLA0A0E0KY041e-101A0A0E0KY04_ORYPU; Uncharacterized protein
STRINGOPUNC05G01690.11e-92(Oryza punctata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.12e-15WRKY DNA-binding protein 65