PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC05G14870.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 191aa    MW: 19735 Da    PI: 8.6467
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC05G14870.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.82.1e-161261255
              AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     +y+GVr+++ +g+Wv+eIr+p +   r r +lg++ tae Aa a++aa   l+g
  OPUNC05G14870.1 12 RYRGVRRRR-WGKWVSEIRVPGT---RERLWLGSYATAEAAAVAHDAAVCLLRG 61
                     6*****777.**********943...5*********************988887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.8E-241275IPR001471AP2/ERF domain
PfamPF008474.1E-91259IPR001471AP2/ERF domain
SMARTSM003809.1E-261281IPR001471AP2/ERF domain
SuperFamilySSF541713.01E-161264IPR016177DNA-binding domain
PROSITE profilePS5103221.0871275IPR001471AP2/ERF domain
PRINTSPR003673.5E-91324IPR001471AP2/ERF domain
PRINTSPR003673.5E-93551IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    Send to blast
MGRVAASGCG ERYRGVRRRR WGKWVSEIRV PGTRERLWLG SYATAEAAAV AHDAAVCLLR  60
GGRRAMAGAG GLNFPGRALA AAASYGGGGC LSPRSVQRVA SDAGMAADAQ LVDLRREHQP  120
AASPAQPAAA AASSSGSGVA VAVDVAGDGG KQGTRGDTDW CRNGSRSWSS GSEDQLIVYE  180
DLSVDDMEIL M
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1248361e-107AC124836.2 Oryza sativa Japonica Group cultivar Nipponbare chromosome 5 clone OSJNBb0092E21, complete sequence.
GenBankAC1376231e-107AC137623.3 Oryza sativa Japonica Group cultivar Nipponbare chromosome 5 clone P0426G01, complete sequence.
GenBankAP0149611e-107AP014961.1 Oryza sativa Japonica Group DNA, chromosome 5, cultivar: Nipponbare, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020195624.12e-45ethylene-responsive transcription factor ERF020-like
SwissprotQ9C9I83e-30ERF20_ARATH; Ethylene-responsive transcription factor ERF020
TrEMBLA0A0E0L2N41e-130A0A0E0L2N4_ORYPU; Uncharacterized protein
STRINGOPUNC05G14870.11e-131(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP64332951
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71520.18e-13ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]