PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC05G17990.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 270aa    MW: 30029.1 Da    PI: 6.9174
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC05G17990.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY56.94.1e-18129190259
                      --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-S.SSTTEEEEEEES--SS- CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversa.edpkvveitYegeHnhe 59 
                      +Dg++WrKYG K++ +sef r YYrC ++   +C++kk v++++ ++p  + +t ++eH+++
  OPUNC05G17990.1 129 NDGFHWRKYGEKNILNSEFRRLYYRCGYSderNCQAKKYVQQENnKQPPEFRVTLTNEHTCN 190
                      7**************************99889********98751578899********997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1182901.96E-19122191IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.1E-19123190IPR003657WRKY domain
SMARTSM007741.2E-27128191IPR003657WRKY domain
PfamPF031065.3E-21129189IPR003657WRKY domain
PROSITE profilePS5081113.345129192IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    Send to blast
MARRLPKSER SPSPPPGDQR DAAIQELSKG SELATQLMAQ LELIPERELD RRDDALANVR  60
RLSMSLSSSL SALRSEREHY YLASSSSSGA GPVAVTSVSG GGGGGGSRTR KTRRRGSSET  120
VFITTTPEND GFHWRKYGEK NILNSEFRRL YYRCGYSDER NCQAKKYVQQ ENNKQPPEFR  180
VTLTNEHTCN CNALFPDQAS SSSTSQVLDF TKASVSSPLM DSHVGAPIFK EEEEEVPSID  240
ESTRSIMSTI MRNNNDYDEL SPRSWNGGCQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCT8364071e-147CT836407.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA113F18, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015638351.11e-120probable WRKY transcription factor 63
TrEMBLA0A0E0L3U50.0A0A0E0L3U5_ORYPU; Uncharacterized protein
STRINGOPUNC05G17990.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP99932944
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66550.22e-16WRKY DNA-binding protein 67